Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 AL049796.1-201ENST00000565336 1766 ntBASIC17■□□□□ 0.31
TRAV3A0A0B4J244 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 SLC25A24-204ENST00000569674 2357 ntBASIC17■□□□□ 0.31
TRAV3A0A0B4J244 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 BX842568.3-201ENST00000418104 571 ntBASIC17■□□□□ 0.31
TRAV3A0A0B4J244 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV3A0A0B4J244 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 AC024257.2-201ENST00000549699 147 ntBASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 AC133561.4-201ENST00000566112 224 ntBASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRAV3A0A0B4J244 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV3A0A0B4J244 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 AC233992.3-201ENST00000607491 485 ntBASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 AL136162.1-201ENST00000607711 1078 ntBASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV3A0A0B4J244 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms