Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-7A0A0A0MS04 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 DUX4L19-201ENST00000557448 1267 ntBASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRBV6-7A0A0A0MS04 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 SERBP1P1-201ENST00000396021 1160 ntBASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 SYT6-210ENST00000641643 1587 ntBASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-7A0A0A0MS04 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRBV6-7A0A0A0MS04 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 AP005435.1-201ENST00000529293 1178 ntBASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 AC136469.2-201ENST00000623944 1028 ntBASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-7A0A0A0MS04 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms