Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NAA60-220ENST00000573580 758 ntTSL 4 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 AC025171.5-201ENST00000607830 920 ntBASIC11.71□□□□□ -0.53
LMO3Q8TAP4 AC233280.19-201ENST00000633223 136 ntBASIC11.71□□□□□ -0.53
LMO3Q8TAP4 HECTD3-201ENST00000372168 2530 ntTSL 2 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 PRC1-202ENST00000394249 3034 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LMO3Q8TAP4 GRIK3-202ENST00000373093 2955 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LMO3Q8TAP4 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LMO3Q8TAP4 AL355377.2-201ENST00000623595 1751 ntBASIC11.71□□□□□ -0.54
LMO3Q8TAP4 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
LMO3Q8TAP4 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LMO3Q8TAP4 LINC01015-203ENST00000434657 2874 ntTSL 2 BASIC11.71□□□□□ -0.54
LMO3Q8TAP4 LPA-203ENST00000614786 1713 ntTSL 5 BASIC11.71□□□□□ -0.54
LMO3Q8TAP4 FBXO10-202ENST00000432825 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LMO3Q8TAP4 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LMO3Q8TAP4 TCF4-232ENST00000566286 2119 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LMO3Q8TAP4 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
LMO3Q8TAP4 EXOSC2-204ENST00000372358 2040 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 MAB21L1-201ENST00000379919 3028 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 EXOC7-202ENST00000335146 3519 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 ATP13A1-201ENST00000291503 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 Z97055.2-202ENST00000564696 1463 ntBASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 ACTRT1-201ENST00000371124 1437 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 FAIM2-201ENST00000320634 4654 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 SNX13-202ENST00000409604 4146 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 DLG2-208ENST00000404783 1831 ntTSL 2 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 TTC25-201ENST00000377540 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 MATN2-213ENST00000522025 2731 ntTSL 5 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AC141257.1-202ENST00000570288 2239 ntTSL 3 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 NR1I2-202ENST00000393716 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 RPL22L1-201ENST00000295830 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 KRT80-202ENST00000394815 3859 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 SAA4-201ENST00000278222 727 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 LCN2-202ENST00000372998 631 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 HLA-DQA1-202ENST00000374949 1060 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 SCGB2B2-201ENST00000379204 426 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 GCNT2-205ENST00000410107 1255 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AL354707.2-201ENST00000412339 422 ntTSL 2 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 TDGF1P2-201ENST00000413322 562 ntBASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AC008073.1-201ENST00000429717 543 ntTSL 4 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AL603841.1-201ENST00000430516 664 ntBASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AL049812.2-201ENST00000431589 594 ntTSL 2 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 PCCA-AS1-202ENST00000451662 474 ntTSL 5 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AC139491.6-201ENST00000513919 735 ntTSL 3 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AL606534.5-201ENST00000517560 1243 ntBASIC11.7□□□□□ -0.54
LMO3Q8TAP4 CYP4F44P-201ENST00000520423 412 ntBASIC11.7□□□□□ -0.54
LMO3Q8TAP4 NR1H3-230ENST00000527949 1065 ntTSL 2 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 PINLYP-204ENST00000562365 706 ntTSL 2 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AL135818.2-201ENST00000563574 705 ntBASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AP003028.1-201ENST00000577699 1033 ntTSL 5 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 RN7SL525P-201ENST00000579267 280 ntBASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AC097641.2-201ENST00000581517 325 ntBASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AC244517.2-204ENST00000624802 415 ntTSL 3 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AC005086.3-201ENST00000624984 219 ntBASIC11.7□□□□□ -0.54
LMO3Q8TAP4 PPP1R2-207ENST00000625807 245 ntTSL 5 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AC073488.10-201ENST00000633241 778 ntBASIC11.7□□□□□ -0.54
LMO3Q8TAP4 BX005132.2-201ENST00000641254 464 ntBASIC11.7□□□□□ -0.54
LMO3Q8TAP4 PPARD-201ENST00000311565 3774 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 DCTN1-227ENST00000633691 4160 ntTSL 5 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 NT5C1B-202ENST00000359846 2475 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 RPS6KA2-206ENST00000503859 4137 ntTSL 2 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 C12orf40-201ENST00000324616 2776 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 PARG-201ENST00000402038 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 CLNS1A-204ENST00000525428 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 RPS6KA5-202ENST00000536315 2993 ntTSL 2 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 STK31-202ENST00000355870 3326 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 CCDC87-201ENST00000333861 2908 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 CYP24A1-201ENST00000216862 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 AL360004.1-201ENST00000358748 3258 ntTSL 2 BASIC11.7□□□□□ -0.54
LMO3Q8TAP4 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 GPATCH2-201ENST00000366934 3218 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 SMG1P3-205ENST00000522480 4262 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 PHF7-210ENST00000614886 1421 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 LRIF1-201ENST00000369763 3475 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 FUT6-202ENST00000318336 3137 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 TIMM17A-201ENST00000367287 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 TTPA-201ENST00000260116 2338 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 POLB-201ENST00000265421 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 RIC3-204ENST00000419822 1300 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 ZNF75D-201ENST00000370764 2977 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 ZCCHC8-210ENST00000633063 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 PMEPA1-201ENST00000265626 4627 ntTSL 3 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 VPS33A-201ENST00000267199 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 RNF146-202ENST00000356799 2267 ntTSL 2 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 CSNK2B-204ENST00000375885 1061 ntTSL 5 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 C22orf23-202ENST00000403026 765 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 AL163953.1-201ENST00000436530 726 ntTSL 3 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 AC011995.1-201ENST00000437610 578 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 LRTOMT-208ENST00000439209 801 ntTSL 3 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 CLCP1-201ENST00000455251 388 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 AL158071.3-201ENST00000457976 506 ntTSL 2 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 Z98751.2-201ENST00000468716 451 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 RN7SL764P-201ENST00000487337 286 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms