Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 MECP2-212ENST00000611468 603 ntTSL 5 BASIC10.13□□□□□ -0.79
P04436 AC012048.1-201ENST00000622980 595 ntBASIC10.13□□□□□ -0.79
P04436 AC148477.7-201ENST00000623871 428 ntBASIC10.13□□□□□ -0.79
P04436 LINC01669-203ENST00000624105 505 ntTSL 5 BASIC10.13□□□□□ -0.79
P04436 PPP1R2-207ENST00000625807 245 ntTSL 5 BASIC10.13□□□□□ -0.79
P04436 RAPGEF3-201ENST00000389212 3294 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
P04436 DRGX-201ENST00000374139 2738 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
P04436 CFAP52-201ENST00000352665 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
P04436 HMOX2-202ENST00000398595 1644 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
P04436 AC008764.9-201ENST00000624284 2505 ntBASIC10.13□□□□□ -0.79
P04436 NEIL1-201ENST00000355059 3759 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
P04436 LINGO4-201ENST00000368820 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
P04436 POLE3-201ENST00000374169 2109 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
P04436 KPRP-201ENST00000606109 2492 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
P04436 CCDC144CP-201ENST00000340196 2823 ntTSL 2 BASIC10.13□□□□□ -0.79
P04436 GBP6-201ENST00000370456 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
P04436 SHANK2-AS1-201ENST00000429561 2252 ntTSL 2 BASIC10.13□□□□□ -0.79
P04436 CDH2-201ENST00000269141 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
P04436 AL021392.1-201ENST00000426112 2949 ntTSL 2 BASIC10.13□□□□□ -0.79
P04436 LEPROTL1-208ENST00000523116 1389 ntTSL 2 BASIC10.13□□□□□ -0.79
P04436 ADAMTS20-202ENST00000395541 4633 ntTSL 5 BASIC10.13□□□□□ -0.79
P04436 HTR5A-AS1-201ENST00000395731 2703 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
P04436 BCAS3-217ENST00000588462 3559 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
P04436 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
P04436 ZNF423-205ENST00000562871 4514 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
P04436 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
P04436 STAU1-205ENST00000371802 3154 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
P04436 AL117378.1-201ENST00000454596 2305 ntTSL 2 BASIC10.12□□□□□ -0.79
P04436 AC106801.1-201ENST00000518054 1845 ntTSL 5 BASIC10.12□□□□□ -0.79
P04436 FRMPD1-203ENST00000539465 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
P04436 TRIM43B-201ENST00000432468 1341 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
P04436 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC10.12□□□□□ -0.79
P04436 AL592164.1-201ENST00000562814 1976 ntTSL 3 BASIC10.12□□□□□ -0.79
P04436 GAB4-201ENST00000400588 2630 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
P04436 FOXN3P1-201ENST00000325117 1480 ntBASIC10.12□□□□□ -0.79
P04436 ZWILCH-202ENST00000446801 3256 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
P04436 PES1-203ENST00000402281 2760 ntTSL 2 BASIC10.12□□□□□ -0.79
P04436 RBM28-202ENST00000415472 2251 ntTSL 2 BASIC10.12□□□□□ -0.79
P04436 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC10.12□□□□□ -0.79
P04436 ADAMTS7P3-201ENST00000566116 3716 ntBASIC10.12□□□□□ -0.79
P04436 AL445471.2-201ENST00000568143 2443 ntBASIC10.12□□□□□ -0.79
P04436 IPO13-202ENST00000372343 3894 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
P04436 ZNF765-206ENST00000594030 7588 ntTSL 4 BASIC10.12□□□□□ -0.79
P04436 SCG2-201ENST00000305409 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
P04436 NME9-201ENST00000317876 1930 ntTSL 5 BASIC10.12□□□□□ -0.79
P04436 TARS2-204ENST00000369064 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
P04436 SETDB1-203ENST00000368963 1045 ntTSL 5 BASIC10.12□□□□□ -0.79
P04436 BET1-204ENST00000425626 601 ntTSL 2 BASIC10.12□□□□□ -0.79
P04436 HMGN2P17-201ENST00000425872 743 ntBASIC10.12□□□□□ -0.79
P04436 RPL3P1-201ENST00000437106 1211 ntBASIC10.12□□□□□ -0.79
P04436 HMGN2P11-201ENST00000446054 403 ntBASIC10.12□□□□□ -0.79
P04436 AC103591.1-201ENST00000448345 556 ntBASIC10.12□□□□□ -0.79
P04436 AL031773.1-201ENST00000453579 554 ntTSL 3 BASIC10.12□□□□□ -0.79
P04436 AP003041.1-201ENST00000487566 287 ntBASIC10.12□□□□□ -0.79
P04436 AC108471.2-202ENST00000529094 498 ntTSL 5 BASIC10.12□□□□□ -0.79
P04436 AL663061.2-201ENST00000538358 233 ntBASIC10.12□□□□□ -0.79
P04436 PIGHP1-201ENST00000558833 565 ntBASIC10.12□□□□□ -0.79
P04436 AC090376.1-202ENST00000587276 470 ntTSL 3 BASIC10.12□□□□□ -0.79
P04436 AC022031.2-201ENST00000592936 555 ntTSL 4 BASIC10.12□□□□□ -0.79
P04436 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
P04436 AP000350.5-201ENST00000609825 613 ntBASIC10.12□□□□□ -0.79
P04436 AC239859.5-201ENST00000614100 1232 ntBASIC10.12□□□□□ -0.79
P04436 AC012186.3-201ENST00000623850 485 ntBASIC10.12□□□□□ -0.79
P04436 MIR486-2-201ENST00000637446 64 ntBASIC10.12□□□□□ -0.79
P04436 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
P04436 TNXB-201ENST00000375244 13132 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
P04436 ZNF488-201ENST00000585316 3496 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
P04436 SCGB2B2-203ENST00000601241 2505 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
P04436 ARMC8-223ENST00000538260 4728 ntTSL 2 BASIC10.12□□□□□ -0.79
P04436 COX16-201ENST00000389912 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
P04436 NAGA-203ENST00000403363 1856 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
P04436 TACC2-206ENST00000368999 3879 ntTSL 5 BASIC10.12□□□□□ -0.79
P04436 ECM2-204ENST00000444490 2648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
P04436 MARK2P13-201ENST00000419108 1849 ntBASIC10.12□□□□□ -0.79
P04436 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
P04436 CTAGE16P-201ENST00000435601 2412 ntBASIC10.12□□□□□ -0.79
P04436 SVIP-201ENST00000354193 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
P04436 POLR1B-217ENST00000541869 5059 ntTSL 2 BASIC10.11□□□□□ -0.79
P04436 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC10.11□□□□□ -0.79
P04436 PHF20L1-206ENST00000395376 2236 ntTSL 5 BASIC10.11□□□□□ -0.79
P04436 ACVR1-203ENST00000410057 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 LINC01777-201ENST00000423197 2077 ntTSL 2 BASIC10.11□□□□□ -0.79
P04436 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC10.11□□□□□ -0.79
P04436 GPR176-202ENST00000543580 1755 ntTSL 2 BASIC10.11□□□□□ -0.79
P04436 BEND7-202ENST00000378605 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 MPP2-201ENST00000269095 4414 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 DRICH1-201ENST00000317749 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 VPS37A-210ENST00000521829 1307 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 PPAT-201ENST00000264220 3682 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 ZNF213-AS1-204ENST00000572691 3232 ntTSL 5 BASIC10.11□□□□□ -0.79
P04436 CLIP1-209ENST00000537178 5229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 IP6K2-210ENST00000431721 2174 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 ERC2-IT1-201ENST00000629461 2177 ntBASIC10.11□□□□□ -0.79
P04436 SPTBN2-211ENST00000617502 3498 ntTSL 5 BASIC10.11□□□□□ -0.79
P04436 CHP1-201ENST00000334660 3329 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC10.11□□□□□ -0.79
P04436 AC090099.1-201ENST00000340135 1723 ntTSL 2 BASIC10.11□□□□□ -0.79
P04436 DSCAML1-201ENST00000321322 6899 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 SGCD-203ENST00000517913 1412 ntTSL 5 BASIC10.11□□□□□ -0.79
P04436 ATP2A1-203ENST00000536376 3130 ntTSL 2 BASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms