Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL034548.1-201ENST00000608495 1672 ntBASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 LINC00969-247ENST00000608737 956 ntTSL 5 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 OR13I1P-201ENST00000609811 1264 ntBASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 NEAT1_3.1-201ENST00000613347 159 ntBASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 AC134879.3-201ENST00000614446 254 ntBASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 ETV7-208ENST00000627426 1285 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 UMPS-211ENST00000628619 228 ntTSL 5 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 PCDHGA4-201ENST00000571252 4778 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 CADM1-212ENST00000542447 4223 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 ABCB9-206ENST00000442028 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 ZNF556-201ENST00000307635 6574 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 POMGNT1-202ENST00000371992 2934 ntTSL 2 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 AAGAB-201ENST00000261880 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 FAM60A-206ENST00000539409 2532 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 NLRC5-217ENST00000539144 6505 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 ATAT1-203ENST00000329992 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 RGS7BP-201ENST00000334025 4160 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 C1orf147-201ENST00000367119 2096 ntTSL 2 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 DAP3-202ENST00000368336 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 CDC16-201ENST00000252457 2034 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 CDC16-205ENST00000375308 2034 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 PTGER4-201ENST00000302472 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 ZFP57-203ENST00000488757 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 PAK1-202ENST00000356341 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 EHD2-201ENST00000263277 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 BCAS3-217ENST00000588462 3559 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 PPARD-204ENST00000418635 3453 ntTSL 2 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 TECPR2-201ENST00000359520 8686 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 GPR85-204ENST00000449591 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 AC012074.1-201ENST00000313031 1552 ntBASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 EIF3L-201ENST00000381683 1599 ntTSL 2 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 GPALPP1-203ENST00000379151 1393 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 TRIP12-203ENST00000389044 6405 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 IL18-201ENST00000280357 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 SLC51B-201ENST00000334287 940 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 MIR194-2-201ENST00000384864 85 ntBASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 THRB-AS1-201ENST00000432368 1216 ntTSL 2 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 AL670729.1-201ENST00000436779 283 ntTSL 5 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 AC008132.2-201ENST00000437537 391 ntBASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 CCDC144NL-AS1-206ENST00000443508 1216 ntTSL 3 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 AC103591.1-201ENST00000448345 556 ntBASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 RN7SL634P-201ENST00000485467 292 ntBASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 BTF3L4-205ENST00000489308 794 ntTSL 2 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 AC139491.6-201ENST00000513919 735 ntTSL 3 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 THOC3-210ENST00000514861 628 ntTSL 3 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 AC106795.1-201ENST00000515065 628 ntTSL 3 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 PINX1-203ENST00000519088 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 RN7SL260P-201ENST00000521103 282 ntBASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 NR1H3-230ENST00000527949 1065 ntTSL 2 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 TMA16P1-201ENST00000529148 618 ntBASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 AP001189.3-201ENST00000531511 651 ntTSL 3 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 PHBP21-201ENST00000562636 823 ntBASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 PPCDC-210ENST00000568649 926 ntTSL 5 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 AC098617.1-207ENST00000594591 810 ntTSL 5 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 ZNF548-207ENST00000597400 589 ntTSL 3 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 AC008750.4-201ENST00000600974 219 ntTSL 3 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 RMRP-201ENST00000602361 268 ntBASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 AL772337.4-201ENST00000610707 745 ntBASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 Metazoa_SRP.102-201ENST00000613350 315 ntBASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 AC032044.2-201ENST00000623383 186 ntBASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 AL021920.1-201ENST00000624517 406 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 AL603764.2-201ENST00000636038 344 ntBASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 SKP2-202ENST00000274255 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 FKBP9P1-202ENST00000455909 2451 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 PPAT-201ENST00000264220 3682 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 ALAS1-202ENST00000394965 2430 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 WASHC2A-204ENST00000399339 4323 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 CDYL-202ENST00000343762 3241 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 DNMBP-AS1-202ENST00000434409 2034 ntTSL 2 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 HOXA-AS2-201ENST00000517550 2022 ntTSL 2 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 PLEKHG3-204ENST00000484731 3001 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 TMX3-201ENST00000299608 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 EFCAB6-201ENST00000262726 4869 ntAPPRIS P4 TSL 2 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 KRT80-202ENST00000394815 3859 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 ZFYVE28-206ENST00000508471 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 HPS4-202ENST00000398145 4497 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 CREB3L4-205ENST00000368607 1752 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 RAB6B-207ENST00000543906 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NPIPA3F8WFD2 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 AC073476.3-201ENST00000563949 2507 ntBASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 LINC00667-205ENST00000582008 3979 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 CAP1-204ENST00000372798 1563 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 AC078846.1-201ENST00000608694 7083 ntBASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 FRMPD1-203ENST00000539465 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 PPARGC1B-204ENST00000403750 3146 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 LINC00668-204ENST00000580197 2343 ntTSL 2 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 CPA4-210ENST00000493259 1512 ntTSL 2 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 TMEM8B-201ENST00000377988 3731 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 EFCAB12-201ENST00000326085 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 882.5 ms