Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SLC16A6-202ENST00000580666 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 BRCC3-204ENST00000369462 2846 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 DHX15-201ENST00000336812 2994 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 VDR-206ENST00000549336 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 LINC02145-202ENST00000507444 2419 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 CSMD2-202ENST00000338325 1544 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 REG4-201ENST00000256585 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 TUBAP-201ENST00000425085 1352 ntBASIC11.81□□□□□ -0.52
LMO3Q8TAP4 SEC31A-228ENST00000509142 3861 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 EVL-203ENST00000544450 3704 ntTSL 2 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 PPRC1-202ENST00000370012 2163 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 THRB-201ENST00000280696 1718 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 ABLIM1-201ENST00000277895 2657 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 LRP5L-208ENST00000610821 3602 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 PLEKHA7-211ENST00000531066 4561 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 PSMB1-201ENST00000262193 928 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 FUNDC2P1-201ENST00000327891 570 ntBASIC11.81□□□□□ -0.52
LMO3Q8TAP4 MOG-217ENST00000376891 889 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 MOG-219ENST00000376898 1027 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 MOG-222ENST00000396701 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 MOG-223ENST00000396704 675 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 MOG-224ENST00000416766 630 ntTSL 5 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 Z82196.1-201ENST00000423712 768 ntTSL 3 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 HORMAD2-AS1-201ENST00000429350 902 ntTSL 3 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 AL590408.1-201ENST00000430905 453 ntTSL 3 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 AC147651.2-201ENST00000434541 420 ntTSL 3 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 AC020978.1-201ENST00000465542 337 ntBASIC11.81□□□□□ -0.52
LMO3Q8TAP4 TCP10-205ENST00000476779 646 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 FAM104B-205ENST00000477847 1170 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 AC020899.1-201ENST00000492855 602 ntBASIC11.81□□□□□ -0.52
LMO3Q8TAP4 MOG-233ENST00000494692 958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 AC106774.3-201ENST00000505444 169 ntBASIC11.81□□□□□ -0.52
LMO3Q8TAP4 AC091965.1-201ENST00000512406 440 ntTSL 3 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 AC011773.4-201ENST00000562577 487 ntTSL 2 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 BX571673.1-201ENST00000621768 822 ntBASIC11.81□□□□□ -0.52
LMO3Q8TAP4 AL021920.1-201ENST00000624517 406 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 CELF2-201ENST00000354897 1754 ntTSL 5 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 CCNB1IP1-205ENST00000398169 1631 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 TP53-209ENST00000504937 2271 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 COPS4-206ENST00000509093 2273 ntTSL 2 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 TP53-224ENST00000619186 2271 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 PLK4-211ENST00000515069 3431 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 KIAA0040-203ENST00000545251 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 AK7-204ENST00000555570 1345 ntTSL 2 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 LINC01235-201ENST00000604724 2328 ntTSL 2 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 AC097374.1-202ENST00000582835 3329 ntTSL 2 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 EPSTI1-202ENST00000313640 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
LMO3Q8TAP4 ARHGAP19-SLIT1-202ENST00000479633 1876 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 CFAP65-207ENST00000441968 3416 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 CAPS-203ENST00000588776 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 ZSCAN31-214ENST00000446474 2562 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 ADAMTS20-202ENST00000395541 4633 ntTSL 5 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 PLA2G2D-201ENST00000375105 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 RARRES3-202ENST00000354445 696 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 ETNK2-201ENST00000367197 843 ntTSL 3 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 RPL36A-HNRNPH2-202ENST00000409338 572 ntTSL 4 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 NTM-AS1-201ENST00000416725 703 ntTSL 2 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 SUPT4H1P1-201ENST00000423067 340 ntBASIC11.8□□□□□ -0.52
LMO3Q8TAP4 RPL12P2-201ENST00000424565 493 ntBASIC11.8□□□□□ -0.52
LMO3Q8TAP4 AL392172.1-205ENST00000435378 768 ntTSL 5 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 RN7SL831P-201ENST00000460344 319 ntBASIC11.8□□□□□ -0.52
LMO3Q8TAP4 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 LINC00266-2P-201ENST00000509776 454 ntBASIC11.8□□□□□ -0.52
LMO3Q8TAP4 AC233964.1-201ENST00000512165 1089 ntBASIC11.8□□□□□ -0.52
LMO3Q8TAP4 ERH-202ENST00000555373 586 ntTSL 2 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 AF096876.1-201ENST00000565564 444 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 FAM222B-210ENST00000582059 561 ntTSL 4 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 AC005154.5-201ENST00000583191 368 ntTSL 2 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 AC009955.3-201ENST00000596829 448 ntBASIC11.8□□□□□ -0.52
LMO3Q8TAP4 RUVBL2-212ENST00000627972 1065 ntTSL 5 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 TTN-AS1-270ENST00000630096 915 ntTSL 5 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 AC084337.2-202ENST00000640959 595 ntAPPRIS P5 TSL 4 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 SEMA4A-204ENST00000368285 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 MOB1A-201ENST00000396049 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 COLQ-203ENST00000383788 3005 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 AC068473.3-202ENST00000589723 4167 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 PLXNB2-213ENST00000610984 3443 ntTSL 5 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 ASB4-203ENST00000428113 1547 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 INSC-202ENST00000379556 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 XRCC6-206ENST00000428575 2148 ntTSL 2 BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 TCTN3-201ENST00000265993 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 EIF3C-202ENST00000395587 3137 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LMO3Q8TAP4 CCT6P3-203ENST00000452026 1383 ntBASIC11.79□□□□□ -0.52
LMO3Q8TAP4 AC008760.2-201ENST00000614781 1357 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms