RNA–Protein interactions for RNA: ENST00000588776.6

CAPS-203, Transcript of calcyphosine, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPS, Length 3,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPS-203ENST00000588776 NISCHQ9Y2I1 1504 aa21.32■■□□□ 1
CAPS-203ENST00000588776 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
CAPS-203ENST00000588776 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
CAPS-203ENST00000588776 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
CAPS-203ENST00000588776 EHMT2Q96KQ7 1210 aa18.9■□□□□ 0.62
CAPS-203ENST00000588776 PCGF6Q9BYE7 350 aa18.59■□□□□ 0.57
CAPS-203ENST00000588776 FAM9AQ8IZU1 332 aaPredicted RBP18.51■□□□□ 0.55
CAPS-203ENST00000588776 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
CAPS-203ENST00000588776 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
CAPS-203ENST00000588776 TTBK1Q5TCY1 1321 aaPredicted RBP18.19■□□□□ 0.5
CAPS-203ENST00000588776 PPARGC1BQ86YN6 1023 aaKnown RBP18.17■□□□□ 0.5
CAPS-203ENST00000588776 TRIM41Q8WV44 630 aa18.02■□□□□ 0.48
CAPS-203ENST00000588776 HRCP23327 699 aa17.95■□□□□ 0.46
CAPS-203ENST00000588776 MYO15BQ96JP2 1530 aa17.9■□□□□ 0.46
CAPS-203ENST00000588776 ZCCHC6Q5VYS8 1495 aaKnown RBP17.84■□□□□ 0.45
CAPS-203ENST00000588776 RANGAP1P46060 587 aaPredicted RBP17.78■□□□□ 0.44
CAPS-203ENST00000588776 ABCC9O60706 1549 aa17.66■□□□□ 0.42
CAPS-203ENST00000588776 TRIM26Q12899 539 aaPredicted RBP17.63■□□□□ 0.41
CAPS-203ENST00000588776 CCER1Q8TC90 406 aaPredicted RBP17.5■□□□□ 0.39
CAPS-203ENST00000588776 UBTFP17480 764 aaKnown RBP17.47■□□□□ 0.39
CAPS-203ENST00000588776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
CAPS-203ENST00000588776 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
CAPS-203ENST00000588776 PABPN1Q86U42 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
CAPS-203ENST00000588776 CCDC180Q9P1Z9 1646 aa17.38■□□□□ 0.37
CAPS-203ENST00000588776 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
CAPS-203ENST00000588776 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
CAPS-203ENST00000588776 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
CAPS-203ENST00000588776 APLP2Q06481 763 aa17.18■□□□□ 0.34
CAPS-203ENST00000588776 RSF1Q96T23 1441 aaPredicted RBP17.18■□□□□ 0.34
CAPS-203ENST00000588776 DCAF1Q9Y4B6 1507 aa17.07■□□□□ 0.32
CAPS-203ENST00000588776 CECR2Q9BXF3 1484 aa17.07■□□□□ 0.32
CAPS-203ENST00000588776 ATP1B4Q9UN42 357 aaPredicted RBP17.03■□□□□ 0.32
CAPS-203ENST00000588776 ITGAEP38570 1179 aa17.03■□□□□ 0.32
CAPS-203ENST00000588776 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
CAPS-203ENST00000588776 PELP1Q8IZL8 1130 aaKnown RBP16.91■□□□□ 0.3
CAPS-203ENST00000588776 DIEXFQ68CQ4 756 aaKnown RBP16.9■□□□□ 0.3
CAPS-203ENST00000588776 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
CAPS-203ENST00000588776 CENPBP07199 599 aaPredicted RBP16.81■□□□□ 0.28
CAPS-203ENST00000588776 MROH2BQ7Z745 1585 aa16.8■□□□□ 0.28
CAPS-203ENST00000588776 SCAF1Q9H7N4 1312 aaKnown RBP16.74■□□□□ 0.27
CAPS-203ENST00000588776 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
CAPS-203ENST00000588776 NEUROD1Q13562 356 aa16.68■□□□□ 0.26
CAPS-203ENST00000588776 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
CAPS-203ENST00000588776 WIZO95785 1651 aa16.65■□□□□ 0.26
CAPS-203ENST00000588776 SOGA1O94964 1423 aa16.65■□□□□ 0.26
CAPS-203ENST00000588776 P3H3Q8IVL6 736 aa16.63■□□□□ 0.25
CAPS-203ENST00000588776 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
CAPS-203ENST00000588776 ACIN1Q9UKV3 1341 aaKnown RBP16.56■□□□□ 0.24
CAPS-203ENST00000588776 CEP162Q5TB80 1403 aa16.56■□□□□ 0.24
CAPS-203ENST00000588776 ZNF316A6NFI3 1004 aaPredicted RBP16.55■□□□□ 0.24
CAPS-203ENST00000588776 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
CAPS-203ENST00000588776 NACADO15069 1562 aa16.5■□□□□ 0.23
CAPS-203ENST00000588776 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
CAPS-203ENST00000588776 CNGB1Q14028 1251 aaPredicted RBP16.49■□□□□ 0.23
CAPS-203ENST00000588776 MIER1Q8N108 512 aa16.46■□□□□ 0.23
CAPS-203ENST00000588776 ARID3CA6NKF2 412 aa16.43■□□□□ 0.22
CAPS-203ENST00000588776 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
CAPS-203ENST00000588776 HIRIP3Q9BW71 556 aaPredicted RBP16.38■□□□□ 0.21
CAPS-203ENST00000588776 WRNQ14191 1432 aaPredicted RBP eCLIP16.38■□□□□ 0.21
CAPS-203ENST00000588776 BCANQ96GW7 911 aa16.37■□□□□ 0.21
CAPS-203ENST00000588776 CLIP1P30622 1438 aa16.37■□□□□ 0.21
CAPS-203ENST00000588776 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
CAPS-203ENST00000588776 KANK4Q5T7N3 995 aaPredicted RBP16.26■□□□□ 0.19
CAPS-203ENST00000588776 GOLGA3Q08378 1498 aa16.25■□□□□ 0.19
CAPS-203ENST00000588776 POLR3GLQ9BT43 218 aa16.23■□□□□ 0.19
CAPS-203ENST00000588776 MYT1Q01538 1121 aa16.19■□□□□ 0.18
CAPS-203ENST00000588776 BAZ1BQ9UIG0 1483 aaKnown RBP16.19■□□□□ 0.18
CAPS-203ENST00000588776 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
CAPS-203ENST00000588776 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.17
CAPS-203ENST00000588776 SMARCA4P51532 1647 aa16.12■□□□□ 0.17
CAPS-203ENST00000588776 SIN3AQ96ST3 1273 aa16.12■□□□□ 0.17
CAPS-203ENST00000588776 TRIM52Q96A61 297 aa16.11■□□□□ 0.17
CAPS-203ENST00000588776 RAPGEF2Q9Y4G8 1499 aa16.11■□□□□ 0.17
CAPS-203ENST00000588776 CEP164Q9UPV0 1460 aa16.1■□□□□ 0.17
CAPS-203ENST00000588776 CHIC2Q9UKJ5 165 aa16.09■□□□□ 0.17
CAPS-203ENST00000588776 SMARCA2P51531 1590 aa16.09■□□□□ 0.17
CAPS-203ENST00000588776 EEA1Q15075 1411 aa16.07■□□□□ 0.16
CAPS-203ENST00000588776 NEFLP07196 543 aa16.05■□□□□ 0.16
CAPS-203ENST00000588776 SENP3-EIF4A1A0A087X0R7 540 aa16.04■□□□□ 0.16
CAPS-203ENST00000588776 ZNF326Q5BKZ1 582 aaKnown RBP16.01■□□□□ 0.15
CAPS-203ENST00000588776 KCNH8Q96L42 1107 aa16.01■□□□□ 0.15
CAPS-203ENST00000588776 FBLN2P98095 1184 aa16■□□□□ 0.15
CAPS-203ENST00000588776 VPS8Q8N3P4 1428 aa15.99■□□□□ 0.15
CAPS-203ENST00000588776 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
CAPS-203ENST00000588776 FKBP8Q14318 412 aa15.94■□□□□ 0.14
CAPS-203ENST00000588776 RRP7BPQ9NSQ0 103 aa15.93■□□□□ 0.14
CAPS-203ENST00000588776 IRX6P78412 446 aaPredicted RBP15.93■□□□□ 0.14
CAPS-203ENST00000588776 KIF27Q86VH2 1401 aa15.91■□□□□ 0.14
CAPS-203ENST00000588776 ANP32CO43423 234 aa15.89■□□□□ 0.13
CAPS-203ENST00000588776 CUX2O14529 1486 aa15.89■□□□□ 0.13
CAPS-203ENST00000588776 ZNF777Q9ULD5 760 aaPredicted RBP15.89■□□□□ 0.13
CAPS-203ENST00000588776 SYNJ1O43426 1573 aa15.88■□□□□ 0.13
CAPS-203ENST00000588776 CCNB3Q8WWL7 1395 aa15.85■□□□□ 0.13
CAPS-203ENST00000588776 CARMIL1Q5VZK9 1371 aa15.82■□□□□ 0.12
CAPS-203ENST00000588776 TONSLQ96HA7 1378 aa15.81■□□□□ 0.12
CAPS-203ENST00000588776 DHX57Q6P158 1386 aaKnown RBP15.8■□□□□ 0.12
CAPS-203ENST00000588776 MTUS2Q5JR59 1369 aa15.79■□□□□ 0.12
CAPS-203ENST00000588776 FOXD1Q16676 465 aa15.79■□□□□ 0.12
CAPS-203ENST00000588776 HNRNPUQ00839 825 aaKnown RBP eCLIP15.79■□□□□ 0.12
CAPS-203ENST00000588776 RAB3GAP2Q9H2M9 1393 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms