Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4B1Q9Y6B7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4B1Q9Y6B7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4B1Q9Y6B7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4B1Q9Y6B7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.24■□□□□ 0.83
AP4B1Q9Y6B7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 FP325331.1-202ENST00000623531 1380 ntBASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4B1Q9Y6B7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 AC096631.2-201ENST00000436136 790 ntBASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP4B1Q9Y6B7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 FEM1AP1-201ENST00000431297 1995 ntBASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 AL139246.5-201ENST00000606645 996 ntBASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 AC009086.3-201ENST00000623486 1008 ntBASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 SYT6-210ENST00000641643 1587 ntBASIC20.21■□□□□ 0.83
AP4B1Q9Y6B7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4B1Q9Y6B7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 UNC93B3-201ENST00000308076 687 ntBASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 AL138724.1-201ENST00000606771 1088 ntBASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 LINC01960-201ENST00000563759 1884 ntBASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP4B1Q9Y6B7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms