Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 GABARAPL3-202ENST00000624044 1851 ntBASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SPCS1Q9Y6A9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 AL161729.1-201ENST00000604104 1402 ntBASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPCS1Q9Y6A9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPCS1Q9Y6A9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SPCS1Q9Y6A9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SPCS1Q9Y6A9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
SPCS1Q9Y6A9 LINC00273-201ENST00000539813 1452 ntBASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPCS1Q9Y6A9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPCS1Q9Y6A9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SPCS1Q9Y6A9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC14.57□□□□□ -0.08
SPCS1Q9Y6A9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPCS1Q9Y6A9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPCS1Q9Y6A9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SPCS1Q9Y6A9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPCS1Q9Y6A9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPCS1Q9Y6A9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.57□□□□□ -0.08
SPCS1Q9Y6A9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPCS1Q9Y6A9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPCS1Q9Y6A9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPCS1Q9Y6A9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms