Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGC4Q9Y5F7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC4Q9Y5F7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC4Q9Y5F7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC4Q9Y5F7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC4Q9Y5F7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC4Q9Y5F7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC4Q9Y5F7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHGC4Q9Y5F7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC4Q9Y5F7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC4Q9Y5F7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC4Q9Y5F7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC4Q9Y5F7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDHGC4Q9Y5F7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC4Q9Y5F7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGC4Q9Y5F7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PCDHGC4Q9Y5F7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGC4Q9Y5F7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDHGC4Q9Y5F7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.44■■□□□ 1.02
PCDHGC4Q9Y5F7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGC4Q9Y5F7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHGC4Q9Y5F7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGC4Q9Y5F7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC4Q9Y5F7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
PCDHGC4Q9Y5F7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
PCDHGC4Q9Y5F7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC4Q9Y5F7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC4Q9Y5F7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC4Q9Y5F7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHGC4Q9Y5F7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHGC4Q9Y5F7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHGC4Q9Y5F7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.42■■□□□ 1.02
PCDHGC4Q9Y5F7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.42■■□□□ 1.02
PCDHGC4Q9Y5F7 AC104187.1-201ENST00000607510 612 ntBASIC21.42■■□□□ 1.02
PCDHGC4Q9Y5F7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC4Q9Y5F7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
PCDHGC4Q9Y5F7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC4Q9Y5F7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PCDHGC4Q9Y5F7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC4Q9Y5F7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC4Q9Y5F7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC4Q9Y5F7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHGC4Q9Y5F7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
PCDHGC4Q9Y5F7 EEF1DP3-203ENST00000566025 782 ntBASIC21.41■■□□□ 1.02
PCDHGC4Q9Y5F7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.41■■□□□ 1.02
PCDHGC4Q9Y5F7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGC4Q9Y5F7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC4Q9Y5F7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC4Q9Y5F7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC4Q9Y5F7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGC4Q9Y5F7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGC4Q9Y5F7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHGC4Q9Y5F7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGC4Q9Y5F7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGC4Q9Y5F7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGC4Q9Y5F7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGC4Q9Y5F7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGC4Q9Y5F7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGC4Q9Y5F7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
PCDHGC4Q9Y5F7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGC4Q9Y5F7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHGC4Q9Y5F7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGC4Q9Y5F7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
PCDHGC4Q9Y5F7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGC4Q9Y5F7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGC4Q9Y5F7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGC4Q9Y5F7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGC4Q9Y5F7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGC4Q9Y5F7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGC4Q9Y5F7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGC4Q9Y5F7 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.39■■□□□ 1.01
PCDHGC4Q9Y5F7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHGC4Q9Y5F7 AC104564.3-201ENST00000582367 638 ntBASIC21.39■■□□□ 1.01
PCDHGC4Q9Y5F7 AC053503.5-201ENST00000601508 636 ntBASIC21.39■■□□□ 1.01
PCDHGC4Q9Y5F7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGC4Q9Y5F7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGC4Q9Y5F7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGC4Q9Y5F7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms