Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
TCAF1Q9Y4C2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.3■■□□□ 1
TCAF1Q9Y4C2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.3■■□□□ 1
TCAF1Q9Y4C2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TCAF1Q9Y4C2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.3■■□□□ 1
TCAF1Q9Y4C2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.3■■□□□ 1
TCAF1Q9Y4C2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.3■■□□□ 1
TCAF1Q9Y4C2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TCAF1Q9Y4C2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.3■■□□□ 1
TCAF1Q9Y4C2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.3■■□□□ 1
TCAF1Q9Y4C2 AC012414.1-201ENST00000556676 535 ntBASIC21.3■■□□□ 1
TCAF1Q9Y4C2 AC005837.3-201ENST00000612163 286 ntBASIC21.3■■□□□ 1
TCAF1Q9Y4C2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.3■■□□□ 1
TCAF1Q9Y4C2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.3■■□□□ 1
TCAF1Q9Y4C2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TCAF1Q9Y4C2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.3■■□□□ 1
TCAF1Q9Y4C2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.3■■□□□ 1
TCAF1Q9Y4C2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 AF106564.1-201ENST00000607058 2553 ntBASIC21.29■■□□□ 1
TCAF1Q9Y4C2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.29■■□□□ 1
TCAF1Q9Y4C2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
TCAF1Q9Y4C2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.28■■□□□ 1
TCAF1Q9Y4C2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.28■■□□□ 1
TCAF1Q9Y4C2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TCAF1Q9Y4C2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.28■■□□□ 1
TCAF1Q9Y4C2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TCAF1Q9Y4C2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TCAF1Q9Y4C2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TCAF1Q9Y4C2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.28■■□□□ 1
TCAF1Q9Y4C2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.28■■□□□ 1
TCAF1Q9Y4C2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TCAF1Q9Y4C2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.27■■□□□ 1
TCAF1Q9Y4C2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.27■■□□□ 1
TCAF1Q9Y4C2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TCAF1Q9Y4C2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TCAF1Q9Y4C2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TCAF1Q9Y4C2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TCAF1Q9Y4C2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.27■■□□□ 1
TCAF1Q9Y4C2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.27■■□□□ 1
TCAF1Q9Y4C2 AL354811.1-201ENST00000610286 706 ntBASIC21.27■■□□□ 1
TCAF1Q9Y4C2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TCAF1Q9Y4C2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TCAF1Q9Y4C2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.27■□□□□ 0.99
TCAF1Q9Y4C2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TCAF1Q9Y4C2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.26■□□□□ 0.99
TCAF1Q9Y4C2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCAF1Q9Y4C2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms