Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 C17orf82-201ENST00000623772 1530 ntBASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.67■□□□□ 0.42
KCNIP3Q9Y2W7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 AC004987.1-201ENST00000428627 508 ntBASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNIP3Q9Y2W7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 AC009102.2-201ENST00000606772 1639 ntBASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 OR7E47P-201ENST00000546390 1422 ntBASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 ABHD17AP5-201ENST00000580133 923 ntBASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP3Q9Y2W7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
KCNIP3Q9Y2W7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
KCNIP3Q9Y2W7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.64■□□□□ 0.41
KCNIP3Q9Y2W7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNIP3Q9Y2W7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KCNIP3Q9Y2W7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.64■□□□□ 0.41
KCNIP3Q9Y2W7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.64■□□□□ 0.41
KCNIP3Q9Y2W7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.64■□□□□ 0.41
KCNIP3Q9Y2W7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNIP3Q9Y2W7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNIP3Q9Y2W7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
KCNIP3Q9Y2W7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
KCNIP3Q9Y2W7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KCNIP3Q9Y2W7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
KCNIP3Q9Y2W7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 FEM1AP1-201ENST00000431297 1995 ntBASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 YBX1P4-201ENST00000392794 808 ntBASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 HSD17B1P1-201ENST00000590052 955 ntBASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP3Q9Y2W7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNIP3Q9Y2W7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
KCNIP3Q9Y2W7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.62■□□□□ 0.41
KCNIP3Q9Y2W7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
KCNIP3Q9Y2W7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNIP3Q9Y2W7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNIP3Q9Y2W7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms