Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 MIR6722-201ENST00000617286 78 ntBASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 AC074183.2-201ENST00000623112 922 ntBASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 AL049796.1-201ENST00000565336 1766 ntBASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.29■□□□□ 0.36
RCL1Q9Y2P8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 AC079089.2-201ENST00000531211 1277 ntBASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RCL1Q9Y2P8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.27■□□□□ 0.36
RCL1Q9Y2P8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.27■□□□□ 0.36
RCL1Q9Y2P8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.27■□□□□ 0.36
RCL1Q9Y2P8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RCL1Q9Y2P8 AC010980.1-201ENST00000587192 1142 ntBASIC17.27■□□□□ 0.36
RCL1Q9Y2P8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.27■□□□□ 0.36
RCL1Q9Y2P8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RCL1Q9Y2P8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RCL1Q9Y2P8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RCL1Q9Y2P8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 AC009102.2-201ENST00000606772 1639 ntBASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RCL1Q9Y2P8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 GABARAPL3-202ENST00000624044 1851 ntBASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RCL1Q9Y2P8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms