Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 DUX4L19-201ENST00000557448 1267 ntBASIC21.54■■□□□ 1.04
CHMP2BQ9UQN3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.54■■□□□ 1.04
CHMP2BQ9UQN3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP2BQ9UQN3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP2BQ9UQN3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CHMP2BQ9UQN3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CHMP2BQ9UQN3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP2BQ9UQN3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CHMP2BQ9UQN3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP2BQ9UQN3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 AC011298.3-201ENST00000615796 283 ntBASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 AC073130.3-201ENST00000624389 2278 ntBASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.53■■□□□ 1.04
CHMP2BQ9UQN3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP2BQ9UQN3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP2BQ9UQN3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CHMP2BQ9UQN3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
CHMP2BQ9UQN3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP2BQ9UQN3 AC131281.2-201ENST00000520478 145 ntBASIC21.52■■□□□ 1.04
CHMP2BQ9UQN3 AP005435.1-201ENST00000529293 1178 ntBASIC21.52■■□□□ 1.04
CHMP2BQ9UQN3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP2BQ9UQN3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.52■■□□□ 1.04
CHMP2BQ9UQN3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP2BQ9UQN3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CHMP2BQ9UQN3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP2BQ9UQN3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP2BQ9UQN3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP2BQ9UQN3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
CHMP2BQ9UQN3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.51■■□□□ 1.03
CHMP2BQ9UQN3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.51■■□□□ 1.03
CHMP2BQ9UQN3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP2BQ9UQN3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP2BQ9UQN3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP2BQ9UQN3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CHMP2BQ9UQN3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CHMP2BQ9UQN3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.51■■□□□ 1.03
CHMP2BQ9UQN3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2BQ9UQN3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2BQ9UQN3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2BQ9UQN3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.5■■□□□ 1.03
CHMP2BQ9UQN3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2BQ9UQN3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CHMP2BQ9UQN3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.5■■□□□ 1.03
CHMP2BQ9UQN3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.5■■□□□ 1.03
CHMP2BQ9UQN3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.5■■□□□ 1.03
CHMP2BQ9UQN3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.5■■□□□ 1.03
CHMP2BQ9UQN3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.49■■□□□ 1.03
CHMP2BQ9UQN3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CHMP2BQ9UQN3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP2BQ9UQN3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CHMP2BQ9UQN3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.49■■□□□ 1.03
CHMP2BQ9UQN3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP2BQ9UQN3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP2BQ9UQN3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CHMP2BQ9UQN3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CHMP2BQ9UQN3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP2BQ9UQN3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP2BQ9UQN3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.49■■□□□ 1.03
CHMP2BQ9UQN3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP2BQ9UQN3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
CHMP2BQ9UQN3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMP2BQ9UQN3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP2BQ9UQN3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CHMP2BQ9UQN3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.47■■□□□ 1.03
CHMP2BQ9UQN3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
CHMP2BQ9UQN3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
CHMP2BQ9UQN3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.47■■□□□ 1.03
CHMP2BQ9UQN3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP2BQ9UQN3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CHMP2BQ9UQN3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP2BQ9UQN3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms