Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 GABARAPL3-202ENST00000624044 1851 ntBASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 AL049796.1-201ENST00000565336 1766 ntBASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
COMMD3Q9UBI1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 C17orf82-201ENST00000623772 1530 ntBASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.6■□□□□ 0.57
COMMD3Q9UBI1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3Q9UBI1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COMMD3Q9UBI1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
COMMD3Q9UBI1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.59■□□□□ 0.57
COMMD3Q9UBI1 RNF126P1-201ENST00000567452 1320 ntBASIC18.59■□□□□ 0.57
COMMD3Q9UBI1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.59■□□□□ 0.57
COMMD3Q9UBI1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3Q9UBI1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3Q9UBI1 KRT18P24-201ENST00000344739 1156 ntBASIC18.59■□□□□ 0.57
COMMD3Q9UBI1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.59■□□□□ 0.57
COMMD3Q9UBI1 AC129492.7-201ENST00000622992 756 ntBASIC18.59■□□□□ 0.57
COMMD3Q9UBI1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3Q9UBI1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3Q9UBI1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
COMMD3Q9UBI1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.58■□□□□ 0.57
COMMD3Q9UBI1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD3Q9UBI1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD3Q9UBI1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD3Q9UBI1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD3Q9UBI1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD3Q9UBI1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD3Q9UBI1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
COMMD3Q9UBI1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD3Q9UBI1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD3Q9UBI1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.58■□□□□ 0.57
COMMD3Q9UBI1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD3Q9UBI1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD3Q9UBI1 AC139795.1-202ENST00000500444 432 ntBASIC18.58■□□□□ 0.56
COMMD3Q9UBI1 SNX5-217ENST00000606557 1087 ntBASIC18.58■□□□□ 0.56
COMMD3Q9UBI1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.58■□□□□ 0.56
COMMD3Q9UBI1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.58■□□□□ 0.56
COMMD3Q9UBI1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD3Q9UBI1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.58■□□□□ 0.56
COMMD3Q9UBI1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD3Q9UBI1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD3Q9UBI1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 AP005212.1-201ENST00000581547 1997 ntBASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms