Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 AC087623.3-201ENST00000607047 1098 ntBASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PARPBPQ9NWS1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PARPBPQ9NWS1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PARPBPQ9NWS1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 FAM99A-202ENST00000538190 1989 ntBASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.9■□□□□ 0.62
PARPBPQ9NWS1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
PARPBPQ9NWS1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.89■□□□□ 0.62
PARPBPQ9NWS1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PARPBPQ9NWS1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PARPBPQ9NWS1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PARPBPQ9NWS1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PARPBPQ9NWS1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.89■□□□□ 0.61
PARPBPQ9NWS1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.89■□□□□ 0.61
PARPBPQ9NWS1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.89■□□□□ 0.61
PARPBPQ9NWS1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.89■□□□□ 0.61
PARPBPQ9NWS1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PARPBPQ9NWS1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PARPBPQ9NWS1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PARPBPQ9NWS1 EP400NL-214ENST00000641289 2402 ntBASIC18.89■□□□□ 0.61
PARPBPQ9NWS1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PARPBPQ9NWS1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PARPBPQ9NWS1 C11orf96-202ENST00000528572 1834 ntBASIC18.88■□□□□ 0.61
PARPBPQ9NWS1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PARPBPQ9NWS1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.88■□□□□ 0.61
PARPBPQ9NWS1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PARPBPQ9NWS1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PARPBPQ9NWS1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PARPBPQ9NWS1 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.88■□□□□ 0.61
PARPBPQ9NWS1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.88■□□□□ 0.61
PARPBPQ9NWS1 DUX4L2-201ENST00000561772 1275 ntBASIC18.88■□□□□ 0.61
PARPBPQ9NWS1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
PARPBPQ9NWS1 DUX4L6-201ENST00000626483 1275 ntBASIC18.88■□□□□ 0.61
PARPBPQ9NWS1 DUX4L1-201ENST00000627662 1275 ntBASIC18.88■□□□□ 0.61
PARPBPQ9NWS1 DUX4L8-201ENST00000629013 1275 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms