Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 OR2I1P-207ENST00000453522 948 ntBASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 MIR3621-201ENST00000580529 85 ntBASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB16Q9NRJ7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB16Q9NRJ7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB16Q9NRJ7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB16Q9NRJ7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB16Q9NRJ7 AL034346.1-201ENST00000568244 1277 ntBASIC18.31■□□□□ 0.52
PCDHB16Q9NRJ7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.31■□□□□ 0.52
PCDHB16Q9NRJ7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB16Q9NRJ7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHB16Q9NRJ7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB16Q9NRJ7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHB16Q9NRJ7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDHB16Q9NRJ7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB16Q9NRJ7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB16Q9NRJ7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB16Q9NRJ7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 AC010141.3-201ENST00000456659 717 ntBASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 DUX4L19-201ENST00000557448 1267 ntBASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 MIR3181-201ENST00000578512 73 ntBASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 AC026310.3-201ENST00000625186 2373 ntBASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB16Q9NRJ7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB16Q9NRJ7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHB16Q9NRJ7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHB16Q9NRJ7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PCDHB16Q9NRJ7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB16Q9NRJ7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PCDHB16Q9NRJ7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCDHB16Q9NRJ7 AC006455.2-201ENST00000429931 906 ntBASIC18.29■□□□□ 0.52
PCDHB16Q9NRJ7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB16Q9NRJ7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB16Q9NRJ7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHB16Q9NRJ7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.29■□□□□ 0.52
PCDHB16Q9NRJ7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB16Q9NRJ7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB16Q9NRJ7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB16Q9NRJ7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB16Q9NRJ7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB16Q9NRJ7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB16Q9NRJ7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHB16Q9NRJ7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB16Q9NRJ7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB16Q9NRJ7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHB16Q9NRJ7 AL138724.1-201ENST00000606771 1088 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms