Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXOSC3Q9NQT5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.4■□□□□ 0.7
EXOSC3Q9NQT5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXOSC3Q9NQT5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EXOSC3Q9NQT5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
EXOSC3Q9NQT5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXOSC3Q9NQT5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EXOSC3Q9NQT5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.39■□□□□ 0.7
EXOSC3Q9NQT5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
EXOSC3Q9NQT5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
EXOSC3Q9NQT5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC3Q9NQT5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 AC027612.3-201ENST00000413684 1047 ntBASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 SLC25A24-204ENST00000569674 2357 ntBASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EXOSC3Q9NQT5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 AC026310.3-201ENST00000625186 2373 ntBASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
EXOSC3Q9NQT5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EXOSC3Q9NQT5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
EXOSC3Q9NQT5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
EXOSC3Q9NQT5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
EXOSC3Q9NQT5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
EXOSC3Q9NQT5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
EXOSC3Q9NQT5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms