Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.09■□□□□ 0.49
GCM1Q9NP62 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.09■□□□□ 0.49
GCM1Q9NP62 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
GCM1Q9NP62 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GCM1Q9NP62 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.08■□□□□ 0.49
GCM1Q9NP62 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.08■□□□□ 0.49
GCM1Q9NP62 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GCM1Q9NP62 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GCM1Q9NP62 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GCM1Q9NP62 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GCM1Q9NP62 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.08■□□□□ 0.48
GCM1Q9NP62 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.08■□□□□ 0.48
GCM1Q9NP62 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.08■□□□□ 0.48
GCM1Q9NP62 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.08■□□□□ 0.48
GCM1Q9NP62 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.08■□□□□ 0.48
GCM1Q9NP62 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.08■□□□□ 0.48
GCM1Q9NP62 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.08■□□□□ 0.48
GCM1Q9NP62 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.08■□□□□ 0.48
GCM1Q9NP62 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
GCM1Q9NP62 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GCM1Q9NP62 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GCM1Q9NP62 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.08■□□□□ 0.48
GCM1Q9NP62 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.08■□□□□ 0.48
GCM1Q9NP62 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
GCM1Q9NP62 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.08■□□□□ 0.48
GCM1Q9NP62 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GCM1Q9NP62 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GCM1Q9NP62 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
GCM1Q9NP62 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GCM1Q9NP62 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GCM1Q9NP62 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.07■□□□□ 0.48
GCM1Q9NP62 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
GCM1Q9NP62 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GCM1Q9NP62 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.07■□□□□ 0.48
GCM1Q9NP62 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.07■□□□□ 0.48
GCM1Q9NP62 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GCM1Q9NP62 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
GCM1Q9NP62 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.07■□□□□ 0.48
GCM1Q9NP62 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GCM1Q9NP62 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GCM1Q9NP62 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GCM1Q9NP62 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GCM1Q9NP62 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
GCM1Q9NP62 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.06■□□□□ 0.48
GCM1Q9NP62 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
GCM1Q9NP62 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
GCM1Q9NP62 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GCM1Q9NP62 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.06■□□□□ 0.48
GCM1Q9NP62 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.06■□□□□ 0.48
GCM1Q9NP62 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GCM1Q9NP62 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GCM1Q9NP62 AC079140.4-201ENST00000507448 529 ntBASIC18.06■□□□□ 0.48
GCM1Q9NP62 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.06■□□□□ 0.48
GCM1Q9NP62 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GCM1Q9NP62 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GCM1Q9NP62 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
GCM1Q9NP62 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GCM1Q9NP62 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GCM1Q9NP62 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GCM1Q9NP62 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GCM1Q9NP62 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.05■□□□□ 0.48
GCM1Q9NP62 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GCM1Q9NP62 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GCM1Q9NP62 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GCM1Q9NP62 FAM99A-202ENST00000538190 1989 ntBASIC18.05■□□□□ 0.48
GCM1Q9NP62 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.05■□□□□ 0.48
GCM1Q9NP62 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GCM1Q9NP62 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.05■□□□□ 0.48
GCM1Q9NP62 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.05■□□□□ 0.48
GCM1Q9NP62 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GCM1Q9NP62 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
GCM1Q9NP62 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GCM1Q9NP62 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GCM1Q9NP62 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.05■□□□□ 0.48
GCM1Q9NP62 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.05■□□□□ 0.48
GCM1Q9NP62 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.05■□□□□ 0.48
GCM1Q9NP62 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GCM1Q9NP62 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GCM1Q9NP62 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
GCM1Q9NP62 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GCM1Q9NP62 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GCM1Q9NP62 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GCM1Q9NP62 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GCM1Q9NP62 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GCM1Q9NP62 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GCM1Q9NP62 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.04■□□□□ 0.48
GCM1Q9NP62 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GCM1Q9NP62 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.04■□□□□ 0.48
GCM1Q9NP62 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.04■□□□□ 0.48
GCM1Q9NP62 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GCM1Q9NP62 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GCM1Q9NP62 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
GCM1Q9NP62 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GCM1Q9NP62 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GCM1Q9NP62 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.03■□□□□ 0.48
GCM1Q9NP62 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
GCM1Q9NP62 AL162430.1-201ENST00000480705 870 ntBASIC18.03■□□□□ 0.48
GCM1Q9NP62 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.03■□□□□ 0.48
GCM1Q9NP62 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
GCM1Q9NP62 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms