Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MRM3Q9HC36 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.26■□□□□ 0.99
MRM3Q9HC36 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.26■□□□□ 0.99
MRM3Q9HC36 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MRM3Q9HC36 AC142381.2-201ENST00000566120 298 ntBASIC21.26■□□□□ 0.99
MRM3Q9HC36 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MRM3Q9HC36 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MRM3Q9HC36 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MRM3Q9HC36 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
MRM3Q9HC36 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.26■□□□□ 0.99
MRM3Q9HC36 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
MRM3Q9HC36 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
MRM3Q9HC36 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.25■□□□□ 0.99
MRM3Q9HC36 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.25■□□□□ 0.99
MRM3Q9HC36 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.25■□□□□ 0.99
MRM3Q9HC36 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MRM3Q9HC36 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MRM3Q9HC36 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MRM3Q9HC36 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MRM3Q9HC36 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MRM3Q9HC36 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MRM3Q9HC36 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MRM3Q9HC36 AC012414.1-201ENST00000556676 535 ntBASIC21.25■□□□□ 0.99
MRM3Q9HC36 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MRM3Q9HC36 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MRM3Q9HC36 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.25■□□□□ 0.99
MRM3Q9HC36 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.25■□□□□ 0.99
MRM3Q9HC36 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
MRM3Q9HC36 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
MRM3Q9HC36 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRM3Q9HC36 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRM3Q9HC36 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRM3Q9HC36 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRM3Q9HC36 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
MRM3Q9HC36 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRM3Q9HC36 AL024507.2-201ENST00000606070 2574 ntBASIC21.24■□□□□ 0.99
MRM3Q9HC36 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRM3Q9HC36 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRM3Q9HC36 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.24■□□□□ 0.99
MRM3Q9HC36 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.24■□□□□ 0.99
MRM3Q9HC36 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.24■□□□□ 0.99
MRM3Q9HC36 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.24■□□□□ 0.99
MRM3Q9HC36 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.24■□□□□ 0.99
MRM3Q9HC36 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRM3Q9HC36 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRM3Q9HC36 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.24■□□□□ 0.99
MRM3Q9HC36 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRM3Q9HC36 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRM3Q9HC36 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRM3Q9HC36 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRM3Q9HC36 MIR935-201ENST00000401179 91 ntBASIC21.23■□□□□ 0.99
MRM3Q9HC36 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.23■□□□□ 0.99
MRM3Q9HC36 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.23■□□□□ 0.99
MRM3Q9HC36 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRM3Q9HC36 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.23■□□□□ 0.99
MRM3Q9HC36 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRM3Q9HC36 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MRM3Q9HC36 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.23■□□□□ 0.99
MRM3Q9HC36 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRM3Q9HC36 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
MRM3Q9HC36 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.22■□□□□ 0.99
MRM3Q9HC36 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
MRM3Q9HC36 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MRM3Q9HC36 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.22■□□□□ 0.99
MRM3Q9HC36 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.22■□□□□ 0.99
MRM3Q9HC36 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MRM3Q9HC36 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MRM3Q9HC36 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.21■□□□□ 0.99
MRM3Q9HC36 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.21■□□□□ 0.99
MRM3Q9HC36 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
MRM3Q9HC36 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.21■□□□□ 0.99
MRM3Q9HC36 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MRM3Q9HC36 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.21■□□□□ 0.99
MRM3Q9HC36 AL354811.1-201ENST00000610286 706 ntBASIC21.21■□□□□ 0.99
MRM3Q9HC36 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.21■□□□□ 0.99
MRM3Q9HC36 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MRM3Q9HC36 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MRM3Q9HC36 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.21■□□□□ 0.99
MRM3Q9HC36 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MRM3Q9HC36 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MRM3Q9HC36 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.21■□□□□ 0.99
MRM3Q9HC36 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MRM3Q9HC36 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.2■□□□□ 0.98
MRM3Q9HC36 AF106564.1-201ENST00000607058 2553 ntBASIC21.2■□□□□ 0.98
MRM3Q9HC36 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.2■□□□□ 0.98
MRM3Q9HC36 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.2■□□□□ 0.98
MRM3Q9HC36 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.2■□□□□ 0.98
MRM3Q9HC36 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MRM3Q9HC36 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MRM3Q9HC36 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
MRM3Q9HC36 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MRM3Q9HC36 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MRM3Q9HC36 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MRM3Q9HC36 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
MRM3Q9HC36 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRM3Q9HC36 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRM3Q9HC36 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRM3Q9HC36 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRM3Q9HC36 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRM3Q9HC36 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms