Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NSUN3Q9H649 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
NSUN3Q9H649 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
NSUN3Q9H649 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.55■■□□□ 1.2
NSUN3Q9H649 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.55■■□□□ 1.2
NSUN3Q9H649 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NSUN3Q9H649 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NSUN3Q9H649 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.55■■□□□ 1.2
NSUN3Q9H649 AC008550.1-201ENST00000511500 884 ntBASIC22.55■■□□□ 1.2
NSUN3Q9H649 AP003097.1-201ENST00000530657 1135 ntBASIC22.55■■□□□ 1.2
NSUN3Q9H649 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.55■■□□□ 1.2
NSUN3Q9H649 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NSUN3Q9H649 AC008175.2-201ENST00000612840 297 ntBASIC22.55■■□□□ 1.2
NSUN3Q9H649 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
NSUN3Q9H649 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NSUN3Q9H649 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NSUN3Q9H649 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NSUN3Q9H649 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NSUN3Q9H649 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NSUN3Q9H649 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.54■■□□□ 1.2
NSUN3Q9H649 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.54■■□□□ 1.2
NSUN3Q9H649 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.54■■□□□ 1.2
NSUN3Q9H649 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
NSUN3Q9H649 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
NSUN3Q9H649 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
NSUN3Q9H649 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.54■■□□□ 1.2
NSUN3Q9H649 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NSUN3Q9H649 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NSUN3Q9H649 OR7E47P-201ENST00000546390 1422 ntBASIC22.54■■□□□ 1.2
NSUN3Q9H649 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.54■■□□□ 1.2
NSUN3Q9H649 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.54■■□□□ 1.2
NSUN3Q9H649 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.54■■□□□ 1.2
NSUN3Q9H649 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.53■■□□□ 1.2
NSUN3Q9H649 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NSUN3Q9H649 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
NSUN3Q9H649 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.53■■□□□ 1.2
NSUN3Q9H649 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.53■■□□□ 1.2
NSUN3Q9H649 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.53■■□□□ 1.2
NSUN3Q9H649 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NSUN3Q9H649 AL591742.1-201ENST00000604433 565 ntBASIC22.53■■□□□ 1.2
NSUN3Q9H649 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.53■■□□□ 1.2
NSUN3Q9H649 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NSUN3Q9H649 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NSUN3Q9H649 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
NSUN3Q9H649 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NSUN3Q9H649 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NSUN3Q9H649 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NSUN3Q9H649 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
NSUN3Q9H649 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NSUN3Q9H649 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NSUN3Q9H649 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.52■■□□□ 1.2
NSUN3Q9H649 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NSUN3Q9H649 UBE2SP1-201ENST00000450587 669 ntBASIC22.52■■□□□ 1.2
NSUN3Q9H649 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NSUN3Q9H649 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NSUN3Q9H649 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NSUN3Q9H649 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NSUN3Q9H649 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
NSUN3Q9H649 AP006587.3-201ENST00000525742 1516 ntBASIC22.52■■□□□ 1.19
NSUN3Q9H649 LINC01960-201ENST00000563759 1884 ntBASIC22.51■■□□□ 1.19
NSUN3Q9H649 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.51■■□□□ 1.19
NSUN3Q9H649 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
NSUN3Q9H649 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
NSUN3Q9H649 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NSUN3Q9H649 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
NSUN3Q9H649 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
NSUN3Q9H649 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NSUN3Q9H649 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
NSUN3Q9H649 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.51■■□□□ 1.19
NSUN3Q9H649 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.51■■□□□ 1.19
NSUN3Q9H649 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NSUN3Q9H649 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NSUN3Q9H649 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NSUN3Q9H649 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NSUN3Q9H649 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.5■■□□□ 1.19
NSUN3Q9H649 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.5■■□□□ 1.19
NSUN3Q9H649 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.5■■□□□ 1.19
NSUN3Q9H649 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NSUN3Q9H649 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.5■■□□□ 1.19
NSUN3Q9H649 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
NSUN3Q9H649 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NSUN3Q9H649 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
NSUN3Q9H649 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.49■■□□□ 1.19
NSUN3Q9H649 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
NSUN3Q9H649 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
NSUN3Q9H649 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.49■■□□□ 1.19
NSUN3Q9H649 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.49■■□□□ 1.19
NSUN3Q9H649 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NSUN3Q9H649 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NSUN3Q9H649 POU5F1P4-201ENST00000413175 1085 ntBASIC22.49■■□□□ 1.19
NSUN3Q9H649 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NSUN3Q9H649 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.49■■□□□ 1.19
NSUN3Q9H649 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.49■■□□□ 1.19
NSUN3Q9H649 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.49■■□□□ 1.19
NSUN3Q9H649 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.49■■□□□ 1.19
NSUN3Q9H649 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
NSUN3Q9H649 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
NSUN3Q9H649 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.49■■□□□ 1.19
NSUN3Q9H649 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NSUN3Q9H649 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms