Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATXN3LQ9H3M9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATXN3LQ9H3M9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATXN3LQ9H3M9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATXN3LQ9H3M9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.27■■□□□ 1.16
ATXN3LQ9H3M9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATXN3LQ9H3M9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATXN3LQ9H3M9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.27■■□□□ 1.16
ATXN3LQ9H3M9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.27■■□□□ 1.16
ATXN3LQ9H3M9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
ATXN3LQ9H3M9 AC053503.5-201ENST00000601508 636 ntBASIC22.27■■□□□ 1.16
ATXN3LQ9H3M9 AC010536.3-201ENST00000620306 533 ntBASIC22.27■■□□□ 1.16
ATXN3LQ9H3M9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.27■■□□□ 1.16
ATXN3LQ9H3M9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATXN3LQ9H3M9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.26■■□□□ 1.15
ATXN3LQ9H3M9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 AC139530.1-201ENST00000575312 1977 ntBASIC22.25■■□□□ 1.15
ATXN3LQ9H3M9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 TSPY6P-201ENST00000448518 926 ntBASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ATXN3LQ9H3M9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 CNN2P6-201ENST00000439038 900 ntBASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 SLC7A5P2-201ENST00000553010 536 ntBASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.23■■□□□ 1.15
ATXN3LQ9H3M9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms