Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
LCE3DQ9BYE3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 NFIC-211ENST00000641145 8399 ntBASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 LBH-205ENST00000407930 756 ntTSL 2 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 AC016575.1-201ENST00000607026 382 ntBASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LCE3DQ9BYE3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms