Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL25A1Q9BXS0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL25A1Q9BXS0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL25A1Q9BXS0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 AC073508.3-201ENST00000619697 1419 ntBASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL25A1Q9BXS0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL25A1Q9BXS0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL25A1Q9BXS0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.93■■□□□ 1.1
COL25A1Q9BXS0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL25A1Q9BXS0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL25A1Q9BXS0 AL355472.2-201ENST00000422958 438 ntBASIC21.93■■□□□ 1.1
COL25A1Q9BXS0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.93■■□□□ 1.1
COL25A1Q9BXS0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
COL25A1Q9BXS0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
COL25A1Q9BXS0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.92■■□□□ 1.1
COL25A1Q9BXS0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.92■■□□□ 1.1
COL25A1Q9BXS0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL25A1Q9BXS0 CRYGFP-201ENST00000418459 633 ntBASIC21.92■■□□□ 1.1
COL25A1Q9BXS0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL25A1Q9BXS0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.92■■□□□ 1.1
COL25A1Q9BXS0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL25A1Q9BXS0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.92■■□□□ 1.1
COL25A1Q9BXS0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.92■■□□□ 1.1
COL25A1Q9BXS0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.92■■□□□ 1.1
COL25A1Q9BXS0 MTDHP1-201ENST00000605323 784 ntBASIC21.92■■□□□ 1.1
COL25A1Q9BXS0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL25A1Q9BXS0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.91■■□□□ 1.1
COL25A1Q9BXS0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.91■■□□□ 1.1
COL25A1Q9BXS0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL25A1Q9BXS0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
COL25A1Q9BXS0 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.91■■□□□ 1.1
COL25A1Q9BXS0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.91■■□□□ 1.1
COL25A1Q9BXS0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.91■■□□□ 1.1
COL25A1Q9BXS0 AC105020.6-201ENST00000621523 1217 ntBASIC21.91■■□□□ 1.1
COL25A1Q9BXS0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.91■■□□□ 1.1
COL25A1Q9BXS0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.91■■□□□ 1.1
COL25A1Q9BXS0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
COL25A1Q9BXS0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL25A1Q9BXS0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 RARRES2P10-201ENST00000564312 460 ntBASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
COL25A1Q9BXS0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL25A1Q9BXS0 SLC6A10P-202ENST00000431994 2058 ntBASIC21.89■■□□□ 1.1
COL25A1Q9BXS0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.89■■□□□ 1.09
COL25A1Q9BXS0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.89■■□□□ 1.09
COL25A1Q9BXS0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL25A1Q9BXS0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.89■■□□□ 1.09
COL25A1Q9BXS0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.89■■□□□ 1.09
COL25A1Q9BXS0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
COL25A1Q9BXS0 DUSP8P5-201ENST00000422884 1815 ntBASIC21.89■■□□□ 1.09
COL25A1Q9BXS0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
COL25A1Q9BXS0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL25A1Q9BXS0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL25A1Q9BXS0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL25A1Q9BXS0 AC239809.2-201ENST00000415381 517 ntBASIC21.88■■□□□ 1.09
COL25A1Q9BXS0 AC110285.5-201ENST00000611501 352 ntBASIC21.88■■□□□ 1.09
COL25A1Q9BXS0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.88■■□□□ 1.09
COL25A1Q9BXS0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL25A1Q9BXS0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL25A1Q9BXS0 KRT8P9-201ENST00000558927 1449 ntBASIC21.88■■□□□ 1.09
COL25A1Q9BXS0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL25A1Q9BXS0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL25A1Q9BXS0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.87■■□□□ 1.09
COL25A1Q9BXS0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL25A1Q9BXS0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL25A1Q9BXS0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.87■■□□□ 1.09
COL25A1Q9BXS0 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.87■■□□□ 1.09
COL25A1Q9BXS0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.87■■□□□ 1.09
COL25A1Q9BXS0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL25A1Q9BXS0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.87■■□□□ 1.09
COL25A1Q9BXS0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
COL25A1Q9BXS0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms