Protein–RNA interactions for Protein: Q99795

GPA33, Cell surface A33 antigen, humanhuman

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPA33Q99795 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPA33Q99795 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.27■□□□□ 0.68
GPA33Q99795 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.27■□□□□ 0.68
GPA33Q99795 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPA33Q99795 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPA33Q99795 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPA33Q99795 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPA33Q99795 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPA33Q99795 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPA33Q99795 LINC01006-201ENST00000333319 2292 ntBASIC19.27■□□□□ 0.68
GPA33Q99795 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GPA33Q99795 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.27■□□□□ 0.67
GPA33Q99795 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GPA33Q99795 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GPA33Q99795 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
GPA33Q99795 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GPA33Q99795 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPA33Q99795 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPA33Q99795 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPA33Q99795 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.26■□□□□ 0.67
GPA33Q99795 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPA33Q99795 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPA33Q99795 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPA33Q99795 LINC01521-201ENST00000504184 1943 ntBASIC19.26■□□□□ 0.67
GPA33Q99795 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPA33Q99795 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.26■□□□□ 0.67
GPA33Q99795 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
GPA33Q99795 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GPA33Q99795 AC011298.3-201ENST00000615796 283 ntBASIC19.26■□□□□ 0.67
GPA33Q99795 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.26■□□□□ 0.67
GPA33Q99795 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.25■□□□□ 0.67
GPA33Q99795 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GPA33Q99795 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPA33Q99795 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPA33Q99795 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPA33Q99795 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPA33Q99795 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPA33Q99795 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.25■□□□□ 0.67
GPA33Q99795 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.25■□□□□ 0.67
GPA33Q99795 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GPA33Q99795 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.25■□□□□ 0.67
GPA33Q99795 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.25■□□□□ 0.67
GPA33Q99795 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPA33Q99795 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPA33Q99795 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPA33Q99795 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPA33Q99795 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPA33Q99795 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
GPA33Q99795 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPA33Q99795 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPA33Q99795 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPA33Q99795 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPA33Q99795 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPA33Q99795 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPA33Q99795 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.24■□□□□ 0.67
GPA33Q99795 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GPA33Q99795 DUX4L19-201ENST00000557448 1267 ntBASIC19.24■□□□□ 0.67
GPA33Q99795 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPA33Q99795 AP006587.3-201ENST00000525742 1516 ntBASIC19.24■□□□□ 0.67
GPA33Q99795 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
GPA33Q99795 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPA33Q99795 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GPA33Q99795 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GPA33Q99795 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPA33Q99795 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GPA33Q99795 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
GPA33Q99795 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPA33Q99795 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GPA33Q99795 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.23■□□□□ 0.67
GPA33Q99795 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
GPA33Q99795 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
GPA33Q99795 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.23■□□□□ 0.67
GPA33Q99795 AC131281.2-201ENST00000520478 145 ntBASIC19.23■□□□□ 0.67
GPA33Q99795 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.23■□□□□ 0.67
GPA33Q99795 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.23■□□□□ 0.67
GPA33Q99795 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPA33Q99795 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GPA33Q99795 FEM1AP1-201ENST00000431297 1995 ntBASIC19.23■□□□□ 0.67
GPA33Q99795 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPA33Q99795 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.22■□□□□ 0.67
GPA33Q99795 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPA33Q99795 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPA33Q99795 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
GPA33Q99795 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPA33Q99795 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.22■□□□□ 0.67
GPA33Q99795 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPA33Q99795 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPA33Q99795 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.22■□□□□ 0.67
GPA33Q99795 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
GPA33Q99795 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPA33Q99795 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPA33Q99795 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
GPA33Q99795 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPA33Q99795 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPA33Q99795 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GPA33Q99795 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPA33Q99795 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPA33Q99795 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPA33Q99795 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GPA33Q99795 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms