Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CGREF1Q99674 KRT16P3-201ENST00000439127 1283 ntBASIC20.12■□□□□ 0.81
CGREF1Q99674 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CGREF1Q99674 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CGREF1Q99674 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CGREF1Q99674 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CGREF1Q99674 AL034346.1-201ENST00000568244 1277 ntBASIC20.12■□□□□ 0.81
CGREF1Q99674 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.12■□□□□ 0.81
CGREF1Q99674 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.12■□□□□ 0.81
CGREF1Q99674 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
CGREF1Q99674 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CGREF1Q99674 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CGREF1Q99674 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CGREF1Q99674 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CGREF1Q99674 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.12■□□□□ 0.81
CGREF1Q99674 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CGREF1Q99674 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.11■□□□□ 0.81
CGREF1Q99674 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CGREF1Q99674 AC003102.1-202ENST00000563394 1796 ntBASIC20.11■□□□□ 0.81
CGREF1Q99674 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CGREF1Q99674 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CGREF1Q99674 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CGREF1Q99674 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CGREF1Q99674 AC010525.1-201ENST00000585559 441 ntBASIC20.11■□□□□ 0.81
CGREF1Q99674 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CGREF1Q99674 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CGREF1Q99674 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CGREF1Q99674 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CGREF1Q99674 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CGREF1Q99674 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CGREF1Q99674 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CGREF1Q99674 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CGREF1Q99674 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CGREF1Q99674 LINC01006-201ENST00000333319 2292 ntBASIC20.1■□□□□ 0.81
CGREF1Q99674 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CGREF1Q99674 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CGREF1Q99674 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.1■□□□□ 0.81
CGREF1Q99674 AL391422.3-201ENST00000603791 2761 ntBASIC20.1■□□□□ 0.81
CGREF1Q99674 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CGREF1Q99674 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CGREF1Q99674 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CGREF1Q99674 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CGREF1Q99674 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CGREF1Q99674 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.1■□□□□ 0.81
CGREF1Q99674 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.1■□□□□ 0.81
CGREF1Q99674 AL356740.2-201ENST00000601559 647 ntBASIC20.1■□□□□ 0.81
CGREF1Q99674 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CGREF1Q99674 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.1■□□□□ 0.81
CGREF1Q99674 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CGREF1Q99674 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CGREF1Q99674 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CGREF1Q99674 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CGREF1Q99674 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CGREF1Q99674 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CGREF1Q99674 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
CGREF1Q99674 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
CGREF1Q99674 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CGREF1Q99674 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.09■□□□□ 0.81
CGREF1Q99674 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CGREF1Q99674 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CGREF1Q99674 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CGREF1Q99674 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.09■□□□□ 0.81
CGREF1Q99674 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.09■□□□□ 0.81
CGREF1Q99674 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CGREF1Q99674 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CGREF1Q99674 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.09■□□□□ 0.81
CGREF1Q99674 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CGREF1Q99674 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CGREF1Q99674 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CGREF1Q99674 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CGREF1Q99674 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.08■□□□□ 0.81
CGREF1Q99674 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
CGREF1Q99674 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CGREF1Q99674 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CGREF1Q99674 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CGREF1Q99674 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.08■□□□□ 0.81
CGREF1Q99674 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CGREF1Q99674 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.08■□□□□ 0.81
CGREF1Q99674 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CGREF1Q99674 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CGREF1Q99674 FEM1AP1-201ENST00000431297 1995 ntBASIC20.08■□□□□ 0.8
CGREF1Q99674 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CGREF1Q99674 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CGREF1Q99674 AP004607.7-201ENST00000527152 1677 ntBASIC20.07■□□□□ 0.8
CGREF1Q99674 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.07■□□□□ 0.8
CGREF1Q99674 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.07■□□□□ 0.8
CGREF1Q99674 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.07■□□□□ 0.8
CGREF1Q99674 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.07■□□□□ 0.8
CGREF1Q99674 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.07■□□□□ 0.8
CGREF1Q99674 AC092171.4-201ENST00000609130 632 ntBASIC20.07■□□□□ 0.8
CGREF1Q99674 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.07■□□□□ 0.8
CGREF1Q99674 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CGREF1Q99674 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CGREF1Q99674 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CGREF1Q99674 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CGREF1Q99674 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CGREF1Q99674 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CGREF1Q99674 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CGREF1Q99674 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.06■□□□□ 0.8
CGREF1Q99674 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms