Protein–RNA interactions for Protein: Q96RJ6

FERD3L, Fer3-like protein, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FERD3LQ96RJ6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
FERD3LQ96RJ6 KRT19P1-201ENST00000405746 1186 ntBASIC20.71■□□□□ 0.91
FERD3LQ96RJ6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FERD3LQ96RJ6 AC022517.1-201ENST00000592429 346 ntBASIC20.71■□□□□ 0.91
FERD3LQ96RJ6 AC104187.1-201ENST00000607510 612 ntBASIC20.71■□□□□ 0.91
FERD3LQ96RJ6 AC003102.1-202ENST00000563394 1796 ntBASIC20.71■□□□□ 0.91
FERD3LQ96RJ6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FERD3LQ96RJ6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FERD3LQ96RJ6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FERD3LQ96RJ6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FERD3LQ96RJ6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FERD3LQ96RJ6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FERD3LQ96RJ6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.7■□□□□ 0.9
FERD3LQ96RJ6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
FERD3LQ96RJ6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.7■□□□□ 0.9
FERD3LQ96RJ6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FERD3LQ96RJ6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FERD3LQ96RJ6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.7■□□□□ 0.9
FERD3LQ96RJ6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 EP400NL-214ENST00000641289 2402 ntBASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 AC010542.4-201ENST00000563151 1910 ntBASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 C11orf96-202ENST00000528572 1834 ntBASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FERD3LQ96RJ6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FERD3LQ96RJ6 PKD1P6-201ENST00000343738 4769 ntBASIC20.68■□□□□ 0.9
FERD3LQ96RJ6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
FERD3LQ96RJ6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FERD3LQ96RJ6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.68■□□□□ 0.9
FERD3LQ96RJ6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FERD3LQ96RJ6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
FERD3LQ96RJ6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.68■□□□□ 0.9
FERD3LQ96RJ6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FERD3LQ96RJ6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FERD3LQ96RJ6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FERD3LQ96RJ6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FERD3LQ96RJ6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 AC137761.2-201ENST00000561729 223 ntBASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 EEF1DP3-203ENST00000566025 782 ntBASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 AC145350.3-201ENST00000569033 163 ntBASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 AC053503.5-201ENST00000601508 636 ntBASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 IKBKGP1-201ENST00000612193 1073 ntBASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FERD3LQ96RJ6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms