Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZIM3Q96PE6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZIM3Q96PE6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.69■■□□□ 1.06
ZIM3Q96PE6 BHLHE23-202ENST00000612929 1109 ntBASIC21.69■■□□□ 1.06
ZIM3Q96PE6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ZIM3Q96PE6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZIM3Q96PE6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZIM3Q96PE6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.69■■□□□ 1.06
ZIM3Q96PE6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZIM3Q96PE6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZIM3Q96PE6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.69■■□□□ 1.06
ZIM3Q96PE6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 MIR6722-201ENST00000617286 78 ntBASIC21.68■■□□□ 1.06
ZIM3Q96PE6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 OR7E47P-201ENST00000546390 1422 ntBASIC21.68■■□□□ 1.06
ZIM3Q96PE6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 AC006128.1-201ENST00000624704 1661 ntBASIC21.68■■□□□ 1.06
ZIM3Q96PE6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZIM3Q96PE6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.67■■□□□ 1.06
ZIM3Q96PE6 AC009102.2-201ENST00000606772 1639 ntBASIC21.67■■□□□ 1.06
ZIM3Q96PE6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZIM3Q96PE6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZIM3Q96PE6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZIM3Q96PE6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ZIM3Q96PE6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZIM3Q96PE6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 AL031602.1-201ENST00000633169 911 ntBASIC21.66■■□□□ 1.06
ZIM3Q96PE6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZIM3Q96PE6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZIM3Q96PE6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZIM3Q96PE6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZIM3Q96PE6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZIM3Q96PE6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.65■■□□□ 1.06
ZIM3Q96PE6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
ZIM3Q96PE6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ZIM3Q96PE6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.65■■□□□ 1.06
ZIM3Q96PE6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
ZIM3Q96PE6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
ZIM3Q96PE6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
ZIM3Q96PE6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZIM3Q96PE6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.64■■□□□ 1.05
ZIM3Q96PE6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZIM3Q96PE6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZIM3Q96PE6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.64■■□□□ 1.05
ZIM3Q96PE6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
ZIM3Q96PE6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
ZIM3Q96PE6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 PLK5-205ENST00000642079 1969 ntBASIC21.63■■□□□ 1.05
ZIM3Q96PE6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ZIM3Q96PE6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZIM3Q96PE6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZIM3Q96PE6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZIM3Q96PE6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZIM3Q96PE6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZIM3Q96PE6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZIM3Q96PE6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms