Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
AP1S3Q96PC3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S3Q96PC3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S3Q96PC3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.98■□□□□ 0.15
AP1S3Q96PC3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 DUX4L18-201ENST00000553347 1267 ntBASIC15.97■□□□□ 0.15
AP1S3Q96PC3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.97■□□□□ 0.15
AP1S3Q96PC3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 AC074183.2-201ENST00000623112 922 ntBASIC15.96■□□□□ 0.15
AP1S3Q96PC3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
AP1S3Q96PC3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP1S3Q96PC3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP1S3Q96PC3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP1S3Q96PC3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
AP1S3Q96PC3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms