Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 MIR4785-201ENST00000585005 73 ntBASIC21.01■□□□□ 0.95
CFAP54Q96N23 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.01■□□□□ 0.95
CFAP54Q96N23 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.01■□□□□ 0.95
CFAP54Q96N23 AC009237.3-201ENST00000393279 1427 ntBASIC21.01■□□□□ 0.95
CFAP54Q96N23 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP54Q96N23 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CFAP54Q96N23 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CFAP54Q96N23 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.01■□□□□ 0.95
CFAP54Q96N23 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP54Q96N23 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.01■□□□□ 0.95
CFAP54Q96N23 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP54Q96N23 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP54Q96N23 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.01■□□□□ 0.95
CFAP54Q96N23 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.01■□□□□ 0.95
CFAP54Q96N23 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21■□□□□ 0.95
CFAP54Q96N23 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21■□□□□ 0.95
CFAP54Q96N23 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CFAP54Q96N23 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CFAP54Q96N23 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21■□□□□ 0.95
CFAP54Q96N23 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CFAP54Q96N23 KRT18P20-201ENST00000548986 1279 ntBASIC21■□□□□ 0.95
CFAP54Q96N23 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CFAP54Q96N23 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP54Q96N23 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP54Q96N23 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP54Q96N23 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP54Q96N23 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP54Q96N23 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CFAP54Q96N23 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.99■□□□□ 0.95
CFAP54Q96N23 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.99■□□□□ 0.95
CFAP54Q96N23 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP54Q96N23 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.99■□□□□ 0.95
CFAP54Q96N23 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP54Q96N23 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP54Q96N23 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP54Q96N23 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP54Q96N23 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.98■□□□□ 0.95
CFAP54Q96N23 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP54Q96N23 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CFAP54Q96N23 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CFAP54Q96N23 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP54Q96N23 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.98■□□□□ 0.95
CFAP54Q96N23 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP54Q96N23 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP54Q96N23 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP54Q96N23 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP54Q96N23 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP54Q96N23 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.98■□□□□ 0.95
CFAP54Q96N23 AC145285.6-201ENST00000604632 637 ntBASIC20.98■□□□□ 0.95
CFAP54Q96N23 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.97■□□□□ 0.95
CFAP54Q96N23 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CFAP54Q96N23 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CFAP54Q96N23 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CFAP54Q96N23 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CFAP54Q96N23 AC010141.2-201ENST00000452426 721 ntBASIC20.97■□□□□ 0.95
CFAP54Q96N23 AL353708.3-201ENST00000610272 989 ntBASIC20.97■□□□□ 0.95
CFAP54Q96N23 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.97■□□□□ 0.95
CFAP54Q96N23 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CFAP54Q96N23 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CFAP54Q96N23 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CFAP54Q96N23 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.97■□□□□ 0.95
CFAP54Q96N23 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CFAP54Q96N23 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CFAP54Q96N23 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.97■□□□□ 0.95
CFAP54Q96N23 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.97■□□□□ 0.95
CFAP54Q96N23 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CFAP54Q96N23 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CFAP54Q96N23 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CFAP54Q96N23 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CFAP54Q96N23 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP54Q96N23 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.96■□□□□ 0.95
CFAP54Q96N23 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.96■□□□□ 0.95
CFAP54Q96N23 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP54Q96N23 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP54Q96N23 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP54Q96N23 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CFAP54Q96N23 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP54Q96N23 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP54Q96N23 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.95■□□□□ 0.94
CFAP54Q96N23 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP54Q96N23 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP54Q96N23 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CFAP54Q96N23 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.95■□□□□ 0.94
CFAP54Q96N23 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP54Q96N23 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.95■□□□□ 0.94
CFAP54Q96N23 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.95■□□□□ 0.94
CFAP54Q96N23 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.95■□□□□ 0.94
CFAP54Q96N23 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.95■□□□□ 0.94
CFAP54Q96N23 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP54Q96N23 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.95■□□□□ 0.94
CFAP54Q96N23 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.95■□□□□ 0.94
CFAP54Q96N23 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.95■□□□□ 0.94
CFAP54Q96N23 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.95■□□□□ 0.94
CFAP54Q96N23 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.95■□□□□ 0.94
CFAP54Q96N23 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CFAP54Q96N23 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP54Q96N23 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP54Q96N23 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP54Q96N23 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP54Q96N23 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms