Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.81■■□□□ 1.08
HDAC11Q96DB2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.81■■□□□ 1.08
HDAC11Q96DB2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.81■■□□□ 1.08
HDAC11Q96DB2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC11Q96DB2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC11Q96DB2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC11Q96DB2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
HDAC11Q96DB2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC11Q96DB2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.81■■□□□ 1.08
HDAC11Q96DB2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC11Q96DB2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.81■■□□□ 1.08
HDAC11Q96DB2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC11Q96DB2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC11Q96DB2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.8■■□□□ 1.08
HDAC11Q96DB2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC11Q96DB2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
HDAC11Q96DB2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.8■■□□□ 1.08
HDAC11Q96DB2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC11Q96DB2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC11Q96DB2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.8■■□□□ 1.08
HDAC11Q96DB2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
HDAC11Q96DB2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC11Q96DB2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC11Q96DB2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.8■■□□□ 1.08
HDAC11Q96DB2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC11Q96DB2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 TPRG1LP1-201ENST00000598702 760 ntBASIC21.79■■□□□ 1.08
HDAC11Q96DB2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC11Q96DB2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC11Q96DB2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.78■■□□□ 1.08
HDAC11Q96DB2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC11Q96DB2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC11Q96DB2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC11Q96DB2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC11Q96DB2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC11Q96DB2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC11Q96DB2 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.78■■□□□ 1.08
HDAC11Q96DB2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC11Q96DB2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC11Q96DB2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.78■■□□□ 1.08
HDAC11Q96DB2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC11Q96DB2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HDAC11Q96DB2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.77■■□□□ 1.08
HDAC11Q96DB2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.77■■□□□ 1.08
HDAC11Q96DB2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HDAC11Q96DB2 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.77■■□□□ 1.08
HDAC11Q96DB2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.77■■□□□ 1.08
HDAC11Q96DB2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HDAC11Q96DB2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HDAC11Q96DB2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.77■■□□□ 1.08
HDAC11Q96DB2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.77■■□□□ 1.08
HDAC11Q96DB2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
HDAC11Q96DB2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HDAC11Q96DB2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HDAC11Q96DB2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HDAC11Q96DB2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HDAC11Q96DB2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HDAC11Q96DB2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.76■■□□□ 1.07
HDAC11Q96DB2 AC027612.3-201ENST00000413684 1047 ntBASIC21.76■■□□□ 1.07
HDAC11Q96DB2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
HDAC11Q96DB2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.76■■□□□ 1.07
HDAC11Q96DB2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.76■■□□□ 1.07
HDAC11Q96DB2 MIR6084-201ENST00000622012 110 ntBASIC21.76■■□□□ 1.07
HDAC11Q96DB2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
HDAC11Q96DB2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HDAC11Q96DB2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HDAC11Q96DB2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HDAC11Q96DB2 Z98882.1-201ENST00000622160 2253 ntBASIC21.76■■□□□ 1.07
HDAC11Q96DB2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
HDAC11Q96DB2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.75■■□□□ 1.07
HDAC11Q96DB2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.75■■□□□ 1.07
HDAC11Q96DB2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.75■■□□□ 1.07
HDAC11Q96DB2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HDAC11Q96DB2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HDAC11Q96DB2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HDAC11Q96DB2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.75■■□□□ 1.07
HDAC11Q96DB2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HDAC11Q96DB2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.75■■□□□ 1.07
HDAC11Q96DB2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
HDAC11Q96DB2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
HDAC11Q96DB2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HDAC11Q96DB2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
HDAC11Q96DB2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms