Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.22■■□□□ 1.15
RNF25Q96BH1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF25Q96BH1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF25Q96BH1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF25Q96BH1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF25Q96BH1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF25Q96BH1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF25Q96BH1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.21■■□□□ 1.15
RNF25Q96BH1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.21■■□□□ 1.15
RNF25Q96BH1 AC096631.2-201ENST00000436136 790 ntBASIC22.21■■□□□ 1.15
RNF25Q96BH1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.21■■□□□ 1.15
RNF25Q96BH1 AC126544.1-201ENST00000580842 1059 ntBASIC22.21■■□□□ 1.15
RNF25Q96BH1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF25Q96BH1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF25Q96BH1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF25Q96BH1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
RNF25Q96BH1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF25Q96BH1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
RNF25Q96BH1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF25Q96BH1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
RNF25Q96BH1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF25Q96BH1 AC003102.1-202ENST00000563394 1796 ntBASIC22.2■■□□□ 1.14
RNF25Q96BH1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
RNF25Q96BH1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF25Q96BH1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
RNF25Q96BH1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF25Q96BH1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF25Q96BH1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.2■■□□□ 1.14
RNF25Q96BH1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF25Q96BH1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF25Q96BH1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.2■■□□□ 1.14
RNF25Q96BH1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.2■■□□□ 1.14
RNF25Q96BH1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF25Q96BH1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
RNF25Q96BH1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF25Q96BH1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF25Q96BH1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF25Q96BH1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF25Q96BH1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF25Q96BH1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF25Q96BH1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
RNF25Q96BH1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF25Q96BH1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.19■■□□□ 1.14
RNF25Q96BH1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF25Q96BH1 AC133561.4-201ENST00000566112 224 ntBASIC22.19■■□□□ 1.14
RNF25Q96BH1 SMUG1P1-201ENST00000590640 811 ntBASIC22.19■■□□□ 1.14
RNF25Q96BH1 AC008764.7-201ENST00000593779 1081 ntBASIC22.19■■□□□ 1.14
RNF25Q96BH1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF25Q96BH1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF25Q96BH1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF25Q96BH1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF25Q96BH1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF25Q96BH1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF25Q96BH1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF25Q96BH1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF25Q96BH1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RNF25Q96BH1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF25Q96BH1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RNF25Q96BH1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF25Q96BH1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RNF25Q96BH1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF25Q96BH1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
RNF25Q96BH1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF25Q96BH1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF25Q96BH1 PBX2P1-201ENST00000493219 1291 ntBASIC22.18■■□□□ 1.14
RNF25Q96BH1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF25Q96BH1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF25Q96BH1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF25Q96BH1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF25Q96BH1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF25Q96BH1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF25Q96BH1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF25Q96BH1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.17■■□□□ 1.14
RNF25Q96BH1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF25Q96BH1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF25Q96BH1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF25Q96BH1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF25Q96BH1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF25Q96BH1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF25Q96BH1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
RNF25Q96BH1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF25Q96BH1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF25Q96BH1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF25Q96BH1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.16■■□□□ 1.14
RNF25Q96BH1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.16■■□□□ 1.14
RNF25Q96BH1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF25Q96BH1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF25Q96BH1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF25Q96BH1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF25Q96BH1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RNF25Q96BH1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF25Q96BH1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF25Q96BH1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF25Q96BH1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RNF25Q96BH1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF25Q96BH1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF25Q96BH1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
RNF25Q96BH1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF25Q96BH1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF25Q96BH1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms