Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 AC011298.3-201ENST00000615796 283 ntBASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 AC004687.1-201ENST00000579003 1625 ntBASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB40AQ8WXH6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 AL031432.3-201ENST00000607698 485 ntBASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RAB40AQ8WXH6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 AC006455.2-201ENST00000429931 906 ntBASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 SUDS3P1-201ENST00000505831 966 ntBASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 AC104564.3-201ENST00000582367 638 ntBASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB40AQ8WXH6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 MIR4767-201ENST00000582827 78 ntBASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 OXCT2P1-201ENST00000447263 1535 ntBASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RAB40AQ8WXH6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.52■□□□□ 0.55
RAB40AQ8WXH6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms