Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SYNE2Q8WXH0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
SYNE2Q8WXH0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC8.8□□□□□ -1
SYNE2Q8WXH0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
SYNE2Q8WXH0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SYNE2Q8WXH0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SYNE2Q8WXH0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
SYNE2Q8WXH0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC8.79□□□□□ -1
SYNE2Q8WXH0 AC010203.1-204ENST00000548782 407 ntBASIC8.79□□□□□ -1
SYNE2Q8WXH0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC8.79□□□□□ -1
SYNE2Q8WXH0 PNMA6B-201ENST00000538162 1200 ntBASIC8.79□□□□□ -1
SYNE2Q8WXH0 WWOX-216ENST00000569818 525 ntBASIC8.79□□□□□ -1
SYNE2Q8WXH0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC8.79□□□□□ -1
SYNE2Q8WXH0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC8.79□□□□□ -1
SYNE2Q8WXH0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SYNE2Q8WXH0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SYNE2Q8WXH0 POM121L13P-201ENST00000422362 380 ntBASIC8.79□□□□□ -1
SYNE2Q8WXH0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC8.79□□□□□ -1
SYNE2Q8WXH0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC8.79□□□□□ -1
SYNE2Q8WXH0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
SYNE2Q8WXH0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SYNE2Q8WXH0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC8.79□□□□□ -1
SYNE2Q8WXH0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SYNE2Q8WXH0 AL022342.1-201ENST00000400363 863 ntBASIC8.79□□□□□ -1
SYNE2Q8WXH0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SYNE2Q8WXH0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC8.79□□□□□ -1
SYNE2Q8WXH0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC8.79□□□□□ -1
SYNE2Q8WXH0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC8.79□□□□□ -1
SYNE2Q8WXH0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SYNE2Q8WXH0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 DUSP8P5-201ENST00000422884 1815 ntBASIC8.78□□□□□ -1
SYNE2Q8WXH0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 MYC-208ENST00000641036 567 ntBASIC8.78□□□□□ -1
SYNE2Q8WXH0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 HLA-J-203ENST00000494367 1087 ntBASIC8.78□□□□□ -1
SYNE2Q8WXH0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 AC005224.4-201ENST00000583262 1652 ntBASIC8.78□□□□□ -1
SYNE2Q8WXH0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 KRT18P13-201ENST00000400056 1290 ntBASIC8.78□□□□□ -1
SYNE2Q8WXH0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
SYNE2Q8WXH0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC8.78□□□□□ -1
SYNE2Q8WXH0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC8.77□□□□□ -1
SYNE2Q8WXH0 FAM207BP-201ENST00000447172 505 ntBASIC8.77□□□□□ -1
SYNE2Q8WXH0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC8.77□□□□□ -1
SYNE2Q8WXH0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1
SYNE2Q8WXH0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 SAPCD2P4-201ENST00000424595 1171 ntBASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 MTDHP1-201ENST00000605323 784 ntBASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 AC092368.3-202ENST00000574180 1591 ntBASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 AC239809.2-201ENST00000415381 517 ntBASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 TSPY21P-201ENST00000433481 731 ntBASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 TSPY23P-201ENST00000440136 739 ntBASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 AC010141.2-201ENST00000452426 721 ntBASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 AC010141.3-201ENST00000456659 717 ntBASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SYNE2Q8WXH0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms