Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC44A1Q8WWI5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC44A1Q8WWI5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC44A1Q8WWI5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC44A1Q8WWI5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC44A1Q8WWI5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC44A1Q8WWI5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 GUSBP5-201ENST00000418136 578 ntBASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 AP005435.1-201ENST00000529293 1178 ntBASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 AL138724.1-201ENST00000606771 1088 ntBASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC44A1Q8WWI5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 SERBP1P1-201ENST00000396021 1160 ntBASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC44A1Q8WWI5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC44A1Q8WWI5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC44A1Q8WWI5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC44A1Q8WWI5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC44A1Q8WWI5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC44A1Q8WWI5 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.22■□□□□ 0.99
SLC44A1Q8WWI5 AP006587.3-201ENST00000525742 1516 ntBASIC21.22■□□□□ 0.99
SLC44A1Q8WWI5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SLC44A1Q8WWI5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.22■□□□□ 0.99
SLC44A1Q8WWI5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
SLC44A1Q8WWI5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC44A1Q8WWI5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC44A1Q8WWI5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SLC44A1Q8WWI5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC44A1Q8WWI5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.2■□□□□ 0.99
SLC44A1Q8WWI5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC44A1Q8WWI5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC44A1Q8WWI5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SLC44A1Q8WWI5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC44A1Q8WWI5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC44A1Q8WWI5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC44A1Q8WWI5 SLC47A1P1-202ENST00000449666 945 ntBASIC21.2■□□□□ 0.98
SLC44A1Q8WWI5 AC136469.2-201ENST00000623944 1028 ntBASIC21.2■□□□□ 0.98
SLC44A1Q8WWI5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC44A1Q8WWI5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC44A1Q8WWI5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC44A1Q8WWI5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC44A1Q8WWI5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC44A1Q8WWI5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC44A1Q8WWI5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC44A1Q8WWI5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC44A1Q8WWI5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC44A1Q8WWI5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC44A1Q8WWI5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC44A1Q8WWI5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC44A1Q8WWI5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms