Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SNIP1Q8TAD8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNIP1Q8TAD8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNIP1Q8TAD8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SNIP1Q8TAD8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.05■□□□□ 0.8
SNIP1Q8TAD8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SNIP1Q8TAD8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNIP1Q8TAD8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.05■□□□□ 0.8
SNIP1Q8TAD8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 AP004607.7-201ENST00000527152 1677 ntBASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 AC079089.2-201ENST00000531211 1277 ntBASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 AC073912.3-201ENST00000624414 853 ntBASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNIP1Q8TAD8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 AC120498.10-201ENST00000621827 505 ntBASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 AL359736.2-201ENST00000621992 437 ntBASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNIP1Q8TAD8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 MIR1224-201ENST00000408193 85 ntBASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNIP1Q8TAD8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SNIP1Q8TAD8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNIP1Q8TAD8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SNIP1Q8TAD8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 FAM210CP-201ENST00000445714 574 ntBASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 AL034346.1-201ENST00000568244 1277 ntBASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 AL591742.1-201ENST00000604433 565 ntBASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNIP1Q8TAD8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20■□□□□ 0.79
SNIP1Q8TAD8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNIP1Q8TAD8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNIP1Q8TAD8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNIP1Q8TAD8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNIP1Q8TAD8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNIP1Q8TAD8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20■□□□□ 0.79
SNIP1Q8TAD8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SNIP1Q8TAD8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20■□□□□ 0.79
SNIP1Q8TAD8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20■□□□□ 0.79
SNIP1Q8TAD8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20■□□□□ 0.79
SNIP1Q8TAD8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20■□□□□ 0.79
SNIP1Q8TAD8 MIR4497-201ENST00000583208 89 ntBASIC20■□□□□ 0.79
SNIP1Q8TAD8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SNIP1Q8TAD8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SNIP1Q8TAD8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms