Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.59■□□□□ 0.25
LINC01006Q8NI28 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01006Q8NI28 AC008687.6-201ENST00000596318 630 ntBASIC16.59■□□□□ 0.25
LINC01006Q8NI28 AL591742.1-201ENST00000604433 565 ntBASIC16.59■□□□□ 0.25
LINC01006Q8NI28 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.59■□□□□ 0.25
LINC01006Q8NI28 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01006Q8NI28 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01006Q8NI28 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LINC01006Q8NI28 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01006Q8NI28 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01006Q8NI28 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01006Q8NI28 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
LINC01006Q8NI28 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.58■□□□□ 0.25
LINC01006Q8NI28 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01006Q8NI28 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01006Q8NI28 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LINC01006Q8NI28 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.58■□□□□ 0.24
LINC01006Q8NI28 AL162412.1-201ENST00000567129 965 ntBASIC16.58■□□□□ 0.24
LINC01006Q8NI28 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01006Q8NI28 RBM17P2-201ENST00000616397 1405 ntBASIC16.58■□□□□ 0.24
LINC01006Q8NI28 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.58■□□□□ 0.24
LINC01006Q8NI28 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.58■□□□□ 0.24
LINC01006Q8NI28 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01006Q8NI28 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01006Q8NI28 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01006Q8NI28 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01006Q8NI28 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.58■□□□□ 0.24
LINC01006Q8NI28 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01006Q8NI28 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 AC097658.1-201ENST00000475555 843 ntBASIC16.57■□□□□ 0.24
LINC01006Q8NI28 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01006Q8NI28 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 AC243732.1-201ENST00000612648 864 ntBASIC16.56■□□□□ 0.24
LINC01006Q8NI28 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC01006Q8NI28 AC010980.2-201ENST00000587099 1412 ntBASIC16.55■□□□□ 0.24
LINC01006Q8NI28 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01006Q8NI28 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01006Q8NI28 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LINC01006Q8NI28 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01006Q8NI28 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01006Q8NI28 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01006Q8NI28 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.55■□□□□ 0.24
LINC01006Q8NI28 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.55■□□□□ 0.24
LINC01006Q8NI28 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.55■□□□□ 0.24
LINC01006Q8NI28 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LINC01006Q8NI28 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.55■□□□□ 0.24
LINC01006Q8NI28 AC083880.1-201ENST00000608266 535 ntBASIC16.55■□□□□ 0.24
LINC01006Q8NI28 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LINC01006Q8NI28 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.55■□□□□ 0.24
LINC01006Q8NI28 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.55■□□□□ 0.24
LINC01006Q8NI28 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 AC093827.2-201ENST00000512654 315 ntBASIC16.54■□□□□ 0.24
LINC01006Q8NI28 RARRES2P4-201ENST00000514074 484 ntBASIC16.54■□□□□ 0.24
LINC01006Q8NI28 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 MYC-209ENST00000641252 345 ntBASIC16.54■□□□□ 0.24
LINC01006Q8NI28 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms