Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.6■□□□□ 0.73
VRK2Q86Y07 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
VRK2Q86Y07 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.6■□□□□ 0.73
VRK2Q86Y07 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VRK2Q86Y07 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VRK2Q86Y07 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VRK2Q86Y07 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.6■□□□□ 0.73
VRK2Q86Y07 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VRK2Q86Y07 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VRK2Q86Y07 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VRK2Q86Y07 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VRK2Q86Y07 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VRK2Q86Y07 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VRK2Q86Y07 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VRK2Q86Y07 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VRK2Q86Y07 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VRK2Q86Y07 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VRK2Q86Y07 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.59■□□□□ 0.73
VRK2Q86Y07 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VRK2Q86Y07 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VRK2Q86Y07 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VRK2Q86Y07 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VRK2Q86Y07 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.58■□□□□ 0.73
VRK2Q86Y07 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
VRK2Q86Y07 EDA-201ENST00000338901 1233 ntBASIC19.58■□□□□ 0.72
VRK2Q86Y07 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.58■□□□□ 0.72
VRK2Q86Y07 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.58■□□□□ 0.72
VRK2Q86Y07 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.58■□□□□ 0.72
VRK2Q86Y07 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.58■□□□□ 0.72
VRK2Q86Y07 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.58■□□□□ 0.72
VRK2Q86Y07 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
VRK2Q86Y07 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.58■□□□□ 0.72
VRK2Q86Y07 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VRK2Q86Y07 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
VRK2Q86Y07 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VRK2Q86Y07 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
VRK2Q86Y07 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
VRK2Q86Y07 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VRK2Q86Y07 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VRK2Q86Y07 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
VRK2Q86Y07 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
VRK2Q86Y07 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
VRK2Q86Y07 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VRK2Q86Y07 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.57■□□□□ 0.72
VRK2Q86Y07 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
VRK2Q86Y07 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
VRK2Q86Y07 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VRK2Q86Y07 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.57■□□□□ 0.72
VRK2Q86Y07 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VRK2Q86Y07 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VRK2Q86Y07 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.57■□□□□ 0.72
VRK2Q86Y07 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.57■□□□□ 0.72
VRK2Q86Y07 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.57■□□□□ 0.72
VRK2Q86Y07 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.57■□□□□ 0.72
VRK2Q86Y07 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
VRK2Q86Y07 AF213884.3-201ENST00000563833 479 ntBASIC19.57■□□□□ 0.72
VRK2Q86Y07 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
VRK2Q86Y07 AL355001.2-201ENST00000620617 1191 ntBASIC19.57■□□□□ 0.72
VRK2Q86Y07 AC105233.4-201ENST00000642045 216 ntBASIC19.57■□□□□ 0.72
VRK2Q86Y07 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.57■□□□□ 0.72
VRK2Q86Y07 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VRK2Q86Y07 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VRK2Q86Y07 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VRK2Q86Y07 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.57■□□□□ 0.72
VRK2Q86Y07 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
VRK2Q86Y07 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
VRK2Q86Y07 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VRK2Q86Y07 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VRK2Q86Y07 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VRK2Q86Y07 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
VRK2Q86Y07 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
VRK2Q86Y07 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VRK2Q86Y07 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.56■□□□□ 0.72
VRK2Q86Y07 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VRK2Q86Y07 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VRK2Q86Y07 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.56■□□□□ 0.72
VRK2Q86Y07 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.56■□□□□ 0.72
VRK2Q86Y07 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VRK2Q86Y07 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VRK2Q86Y07 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.55■□□□□ 0.72
VRK2Q86Y07 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VRK2Q86Y07 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VRK2Q86Y07 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
VRK2Q86Y07 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VRK2Q86Y07 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
VRK2Q86Y07 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VRK2Q86Y07 MIR939-201ENST00000401314 82 ntBASIC19.55■□□□□ 0.72
VRK2Q86Y07 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.55■□□□□ 0.72
VRK2Q86Y07 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VRK2Q86Y07 AL031432.3-201ENST00000607698 485 ntBASIC19.55■□□□□ 0.72
VRK2Q86Y07 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VRK2Q86Y07 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.55■□□□□ 0.72
VRK2Q86Y07 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VRK2Q86Y07 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
VRK2Q86Y07 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
VRK2Q86Y07 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.55■□□□□ 0.72
VRK2Q86Y07 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.55■□□□□ 0.72
VRK2Q86Y07 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
VRK2Q86Y07 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms