Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LDB1Q86U70 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.16■□□□□ 0.98
LDB1Q86U70 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LDB1Q86U70 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LDB1Q86U70 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LDB1Q86U70 AC012414.1-201ENST00000556676 535 ntBASIC21.16■□□□□ 0.98
LDB1Q86U70 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.16■□□□□ 0.98
LDB1Q86U70 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.16■□□□□ 0.98
LDB1Q86U70 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.16■□□□□ 0.98
LDB1Q86U70 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
LDB1Q86U70 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LDB1Q86U70 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LDB1Q86U70 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LDB1Q86U70 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LDB1Q86U70 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.16■□□□□ 0.98
LDB1Q86U70 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LDB1Q86U70 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LDB1Q86U70 AC005224.4-201ENST00000583262 1652 ntBASIC21.15■□□□□ 0.98
LDB1Q86U70 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LDB1Q86U70 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LDB1Q86U70 AC055733.4-201ENST00000638462 1354 ntBASIC21.15■□□□□ 0.98
LDB1Q86U70 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LDB1Q86U70 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LDB1Q86U70 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.15■□□□□ 0.98
LDB1Q86U70 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.15■□□□□ 0.98
LDB1Q86U70 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.15■□□□□ 0.98
LDB1Q86U70 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LDB1Q86U70 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.14■□□□□ 0.98
LDB1Q86U70 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LDB1Q86U70 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LDB1Q86U70 AC009237.3-201ENST00000393279 1427 ntBASIC21.14■□□□□ 0.98
LDB1Q86U70 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LDB1Q86U70 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.14■□□□□ 0.98
LDB1Q86U70 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
LDB1Q86U70 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.14■□□□□ 0.97
LDB1Q86U70 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.14■□□□□ 0.97
LDB1Q86U70 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.14■□□□□ 0.97
LDB1Q86U70 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.14■□□□□ 0.97
LDB1Q86U70 PKD1P6-201ENST00000343738 4769 ntBASIC21.14■□□□□ 0.97
LDB1Q86U70 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
LDB1Q86U70 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.14■□□□□ 0.97
LDB1Q86U70 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.13■□□□□ 0.97
LDB1Q86U70 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 IRS3P-201ENST00000223076 1006 ntBASIC21.13■□□□□ 0.97
LDB1Q86U70 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.13■□□□□ 0.97
LDB1Q86U70 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.13■□□□□ 0.97
LDB1Q86U70 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.13■□□□□ 0.97
LDB1Q86U70 FEM1AP4-201ENST00000443167 1987 ntBASIC21.13■□□□□ 0.97
LDB1Q86U70 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LDB1Q86U70 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.13■□□□□ 0.97
LDB1Q86U70 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
LDB1Q86U70 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDB1Q86U70 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDB1Q86U70 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDB1Q86U70 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
LDB1Q86U70 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
LDB1Q86U70 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDB1Q86U70 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.12■□□□□ 0.97
LDB1Q86U70 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LDB1Q86U70 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LDB1Q86U70 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.12■□□□□ 0.97
LDB1Q86U70 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LDB1Q86U70 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LDB1Q86U70 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LDB1Q86U70 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.12■□□□□ 0.97
LDB1Q86U70 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LDB1Q86U70 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDB1Q86U70 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDB1Q86U70 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDB1Q86U70 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LDB1Q86U70 AL024507.2-201ENST00000606070 2574 ntBASIC21.11■□□□□ 0.97
LDB1Q86U70 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LDB1Q86U70 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LDB1Q86U70 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
LDB1Q86U70 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.11■□□□□ 0.97
LDB1Q86U70 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.11■□□□□ 0.97
LDB1Q86U70 AL354811.1-201ENST00000610286 706 ntBASIC21.11■□□□□ 0.97
LDB1Q86U70 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LDB1Q86U70 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LDB1Q86U70 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LDB1Q86U70 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
LDB1Q86U70 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
LDB1Q86U70 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LDB1Q86U70 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LDB1Q86U70 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
LDB1Q86U70 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LDB1Q86U70 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms