Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VPS13BQ7Z7G8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS13BQ7Z7G8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VPS13BQ7Z7G8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VPS13BQ7Z7G8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC13.21□□□□□ -0.29
VPS13BQ7Z7G8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS13BQ7Z7G8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.21□□□□□ -0.29
VPS13BQ7Z7G8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS13BQ7Z7G8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC13.21□□□□□ -0.3
VPS13BQ7Z7G8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
VPS13BQ7Z7G8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VPS13BQ7Z7G8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.21□□□□□ -0.3
VPS13BQ7Z7G8 ESRRAP1-201ENST00000400596 1257 ntBASIC13.21□□□□□ -0.3
VPS13BQ7Z7G8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.21□□□□□ -0.3
VPS13BQ7Z7G8 RPS2P4-201ENST00000476944 856 ntBASIC13.21□□□□□ -0.3
VPS13BQ7Z7G8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.21□□□□□ -0.3
VPS13BQ7Z7G8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.21□□□□□ -0.3
VPS13BQ7Z7G8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VPS13BQ7Z7G8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
VPS13BQ7Z7G8 AP006587.3-201ENST00000525742 1516 ntBASIC13.21□□□□□ -0.3
VPS13BQ7Z7G8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 AC137767.1-201ENST00000602918 1920 ntBASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 AP004607.7-201ENST00000527152 1677 ntBASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 AC012306.2-201ENST00000609350 630 ntBASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS13BQ7Z7G8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 BX088651.1-201ENST00000540551 451 ntBASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 AC138907.5-202ENST00000569484 235 ntBASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.19□□□□□ -0.3
VPS13BQ7Z7G8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 LINC01023-201ENST00000606054 436 ntBASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 AC087742.1-201ENST00000575880 1738 ntBASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 C9orf163-202ENST00000624034 2573 ntBASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 AC093323.1-202ENST00000635031 2045 ntBASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms