Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC099791.2-201ENST00000605725 427 ntBASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 AC091305.1-201ENST00000479476 895 ntBASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
FOXR1Q6PIV2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 SERBP1P1-201ENST00000396021 1160 ntBASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 AC008764.7-201ENST00000593779 1081 ntBASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR1Q6PIV2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 CA15P2-201ENST00000611168 834 ntBASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 Z98882.1-201ENST00000622160 2253 ntBASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
FOXR1Q6PIV2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.93■■□□□ 1.1
FOXR1Q6PIV2 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.93■■□□□ 1.1
FOXR1Q6PIV2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXR1Q6PIV2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
FOXR1Q6PIV2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.93■■□□□ 1.1
FOXR1Q6PIV2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.92■■□□□ 1.1
FOXR1Q6PIV2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.92■■□□□ 1.1
FOXR1Q6PIV2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.92■■□□□ 1.1
FOXR1Q6PIV2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXR1Q6PIV2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXR1Q6PIV2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXR1Q6PIV2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.92■■□□□ 1.1
FOXR1Q6PIV2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.92■■□□□ 1.1
FOXR1Q6PIV2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.92■■□□□ 1.1
FOXR1Q6PIV2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXR1Q6PIV2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.91■■□□□ 1.1
FOXR1Q6PIV2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR1Q6PIV2 PCDHAC2-203ENST00000615316 3011 ntBASIC21.91■■□□□ 1.1
FOXR1Q6PIV2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
FOXR1Q6PIV2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR1Q6PIV2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR1Q6PIV2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR1Q6PIV2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.91■■□□□ 1.1
FOXR1Q6PIV2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR1Q6PIV2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR1Q6PIV2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR1Q6PIV2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR1Q6PIV2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 FEM1AP1-201ENST00000431297 1995 ntBASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms