Protein–RNA interactions for Protein: Q56UQ5

TPT1-like protein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q56UQ5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q56UQ5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q56UQ5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q56UQ5 AC010542.4-201ENST00000563151 1910 ntBASIC16.78■□□□□ 0.28
Q56UQ5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Q56UQ5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q56UQ5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q56UQ5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Q56UQ5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.77■□□□□ 0.28
Q56UQ5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.77■□□□□ 0.28
Q56UQ5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q56UQ5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q56UQ5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Q56UQ5 AP005435.1-201ENST00000529293 1178 ntBASIC16.77■□□□□ 0.28
Q56UQ5 MIR4767-201ENST00000582827 78 ntBASIC16.77■□□□□ 0.28
Q56UQ5 AL136162.1-201ENST00000607711 1078 ntBASIC16.77■□□□□ 0.28
Q56UQ5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.77■□□□□ 0.28
Q56UQ5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.77■□□□□ 0.28
Q56UQ5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Q56UQ5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Q56UQ5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Q56UQ5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.77■□□□□ 0.27
Q56UQ5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q56UQ5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Q56UQ5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.76■□□□□ 0.27
Q56UQ5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Q56UQ5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.76■□□□□ 0.27
Q56UQ5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q56UQ5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Q56UQ5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q56UQ5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Q56UQ5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Q56UQ5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.76■□□□□ 0.27
Q56UQ5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q56UQ5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q56UQ5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Q56UQ5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Q56UQ5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Q56UQ5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Q56UQ5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Q56UQ5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q56UQ5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Q56UQ5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Q56UQ5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Q56UQ5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Q56UQ5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Q56UQ5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q56UQ5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Q56UQ5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q56UQ5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Q56UQ5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Q56UQ5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Q56UQ5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Q56UQ5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.75■□□□□ 0.27
Q56UQ5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.75■□□□□ 0.27
Q56UQ5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.75■□□□□ 0.27
Q56UQ5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Q56UQ5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Q56UQ5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q56UQ5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.75■□□□□ 0.27
Q56UQ5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q56UQ5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q56UQ5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q56UQ5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Q56UQ5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q56UQ5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Q56UQ5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q56UQ5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.74■□□□□ 0.27
Q56UQ5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Q56UQ5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q56UQ5 AC135279.3-201ENST00000610945 1311 ntBASIC16.74■□□□□ 0.27
Q56UQ5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q56UQ5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q56UQ5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.74■□□□□ 0.27
Q56UQ5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q56UQ5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q56UQ5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.74■□□□□ 0.27
Q56UQ5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q56UQ5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Q56UQ5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q56UQ5 AC024257.2-201ENST00000549699 147 ntBASIC16.74■□□□□ 0.27
Q56UQ5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.74■□□□□ 0.27
Q56UQ5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Q56UQ5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Q56UQ5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q56UQ5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q56UQ5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q56UQ5 AC073130.3-201ENST00000624389 2278 ntBASIC16.73■□□□□ 0.27
Q56UQ5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.73■□□□□ 0.27
Q56UQ5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q56UQ5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q56UQ5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.73■□□□□ 0.27
Q56UQ5 AC092667.1-201ENST00000434301 2586 ntBASIC16.73■□□□□ 0.27
Q56UQ5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Q56UQ5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q56UQ5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q56UQ5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q56UQ5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.73■□□□□ 0.27
Q56UQ5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q56UQ5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms