Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 AC026271.2-201ENST00000428091 497 ntBASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 AC087623.3-201ENST00000607047 1098 ntBASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 MIR5787-201ENST00000611784 55 ntBASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D28Q2M2D7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
TBC1D28Q2M2D7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.42■□□□□ 0.54
TBC1D28Q2M2D7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
TBC1D28Q2M2D7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D28Q2M2D7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D28Q2M2D7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D28Q2M2D7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.42■□□□□ 0.54
TBC1D28Q2M2D7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TBC1D28Q2M2D7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TBC1D28Q2M2D7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D28Q2M2D7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D28Q2M2D7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TBC1D28Q2M2D7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D28Q2M2D7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 DUX4L2-201ENST00000561772 1275 ntBASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 DUX4L6-201ENST00000626483 1275 ntBASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 DUX4L1-201ENST00000627662 1275 ntBASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 DUX4L8-201ENST00000629013 1275 ntBASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 DUX4L3-201ENST00000630187 1275 ntBASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 DUX4L7-201ENST00000630678 1275 ntBASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 DUX4L5-201ENST00000630834 1275 ntBASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.4■□□□□ 0.54
TBC1D28Q2M2D7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.39■□□□□ 0.54
TBC1D28Q2M2D7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TBC1D28Q2M2D7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TBC1D28Q2M2D7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TBC1D28Q2M2D7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 FBXW4P1-201ENST00000426721 2239 ntBASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D28Q2M2D7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms