Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VLDLRP98155 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VLDLRP98155 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.76■□□□□ 0.75
VLDLRP98155 LINC01006-201ENST00000333319 2292 ntBASIC19.76■□□□□ 0.75
VLDLRP98155 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VLDLRP98155 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
VLDLRP98155 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VLDLRP98155 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.75■□□□□ 0.75
VLDLRP98155 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VLDLRP98155 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
VLDLRP98155 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VLDLRP98155 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VLDLRP98155 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VLDLRP98155 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VLDLRP98155 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.75■□□□□ 0.75
VLDLRP98155 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.75■□□□□ 0.75
VLDLRP98155 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.75■□□□□ 0.75
VLDLRP98155 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
VLDLRP98155 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VLDLRP98155 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.75■□□□□ 0.75
VLDLRP98155 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
VLDLRP98155 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VLDLRP98155 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
VLDLRP98155 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.75■□□□□ 0.75
VLDLRP98155 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VLDLRP98155 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VLDLRP98155 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VLDLRP98155 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VLDLRP98155 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VLDLRP98155 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VLDLRP98155 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VLDLRP98155 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VLDLRP98155 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VLDLRP98155 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VLDLRP98155 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.74■□□□□ 0.75
VLDLRP98155 AC099791.2-201ENST00000605725 427 ntBASIC19.74■□□□□ 0.75
VLDLRP98155 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.74■□□□□ 0.75
VLDLRP98155 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.74■□□□□ 0.75
VLDLRP98155 AC068587.7-201ENST00000641602 218 ntBASIC19.74■□□□□ 0.75
VLDLRP98155 OXCT2P1-201ENST00000447263 1535 ntBASIC19.74■□□□□ 0.75
VLDLRP98155 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VLDLRP98155 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
VLDLRP98155 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VLDLRP98155 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.73■□□□□ 0.75
VLDLRP98155 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VLDLRP98155 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.73■□□□□ 0.75
VLDLRP98155 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VLDLRP98155 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VLDLRP98155 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.73■□□□□ 0.75
VLDLRP98155 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.73■□□□□ 0.75
VLDLRP98155 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.73■□□□□ 0.75
VLDLRP98155 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.73■□□□□ 0.75
VLDLRP98155 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VLDLRP98155 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
VLDLRP98155 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VLDLRP98155 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
VLDLRP98155 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.73■□□□□ 0.75
VLDLRP98155 AL049796.1-201ENST00000565336 1766 ntBASIC19.72■□□□□ 0.75
VLDLRP98155 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.72■□□□□ 0.75
VLDLRP98155 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.72■□□□□ 0.75
VLDLRP98155 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.72■□□□□ 0.75
VLDLRP98155 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.72■□□□□ 0.75
VLDLRP98155 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
VLDLRP98155 AL136116.3-201ENST00000402907 1138 ntBASIC19.72■□□□□ 0.75
VLDLRP98155 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.72■□□□□ 0.75
VLDLRP98155 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.72■□□□□ 0.75
VLDLRP98155 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VLDLRP98155 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.72■□□□□ 0.75
VLDLRP98155 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
VLDLRP98155 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VLDLRP98155 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VLDLRP98155 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VLDLRP98155 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.71■□□□□ 0.75
VLDLRP98155 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VLDLRP98155 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VLDLRP98155 OR2I1P-207ENST00000453522 948 ntBASIC19.71■□□□□ 0.75
VLDLRP98155 MIR3621-201ENST00000580529 85 ntBASIC19.71■□□□□ 0.75
VLDLRP98155 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VLDLRP98155 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VLDLRP98155 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VLDLRP98155 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VLDLRP98155 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VLDLRP98155 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VLDLRP98155 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.71■□□□□ 0.75
VLDLRP98155 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
VLDLRP98155 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms