Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA4AP68366 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA4AP68366 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA4AP68366 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA4AP68366 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA4AP68366 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.81■□□□□ 0.76
TUBA4AP68366 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TUBA4AP68366 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA4AP68366 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA4AP68366 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA4AP68366 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA4AP68366 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA4AP68366 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA4AP68366 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.8■□□□□ 0.76
TUBA4AP68366 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.8■□□□□ 0.76
TUBA4AP68366 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA4AP68366 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.8■□□□□ 0.76
TUBA4AP68366 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA4AP68366 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
TUBA4AP68366 AC008406.3-201ENST00000620001 1374 ntBASIC19.8■□□□□ 0.76
TUBA4AP68366 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.8■□□□□ 0.76
TUBA4AP68366 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TUBA4AP68366 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA4AP68366 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA4AP68366 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.79■□□□□ 0.76
TUBA4AP68366 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TUBA4AP68366 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TUBA4AP68366 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.79■□□□□ 0.76
TUBA4AP68366 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.79■□□□□ 0.76
TUBA4AP68366 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
TUBA4AP68366 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 MIR4466-201ENST00000606121 54 ntBASIC19.79■□□□□ 0.76
TUBA4AP68366 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.79■□□□□ 0.76
TUBA4AP68366 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.79■□□□□ 0.76
TUBA4AP68366 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA4AP68366 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA4AP68366 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TUBA4AP68366 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA4AP68366 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.78■□□□□ 0.76
TUBA4AP68366 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA4AP68366 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA4AP68366 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA4AP68366 AL512631.2-201ENST00000604634 923 ntBASIC19.78■□□□□ 0.76
TUBA4AP68366 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.78■□□□□ 0.76
TUBA4AP68366 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.78■□□□□ 0.76
TUBA4AP68366 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA4AP68366 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.78■□□□□ 0.76
TUBA4AP68366 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TUBA4AP68366 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA4AP68366 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.77■□□□□ 0.76
TUBA4AP68366 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA4AP68366 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.77■□□□□ 0.76
TUBA4AP68366 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA4AP68366 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.77■□□□□ 0.76
TUBA4AP68366 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA4AP68366 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA4AP68366 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA4AP68366 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.77■□□□□ 0.76
TUBA4AP68366 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TUBA4AP68366 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.77■□□□□ 0.76
TUBA4AP68366 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.77■□□□□ 0.76
TUBA4AP68366 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.77■□□□□ 0.76
TUBA4AP68366 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TUBA4AP68366 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
TUBA4AP68366 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TUBA4AP68366 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA4AP68366 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.76■□□□□ 0.75
TUBA4AP68366 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA4AP68366 AC009102.2-201ENST00000606772 1639 ntBASIC19.76■□□□□ 0.75
TUBA4AP68366 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA4AP68366 AL020996.1-203ENST00000536896 2307 ntBASIC19.76■□□□□ 0.75
TUBA4AP68366 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA4AP68366 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA4AP68366 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TUBA4AP68366 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA4AP68366 GABARAPL3-202ENST00000624044 1851 ntBASIC19.76■□□□□ 0.75
TUBA4AP68366 AL136116.3-201ENST00000402907 1138 ntBASIC19.76■□□□□ 0.75
TUBA4AP68366 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.76■□□□□ 0.75
TUBA4AP68366 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TUBA4AP68366 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA4AP68366 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TUBA4AP68366 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA4AP68366 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA4AP68366 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA4AP68366 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA4AP68366 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms