Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.09■□□□□ 0.65
LSM3P62310 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM3P62310 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM3P62310 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.09■□□□□ 0.65
LSM3P62310 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM3P62310 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM3P62310 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LSM3P62310 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.09■□□□□ 0.65
LSM3P62310 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM3P62310 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSM3P62310 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LSM3P62310 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSM3P62310 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSM3P62310 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSM3P62310 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
LSM3P62310 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSM3P62310 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSM3P62310 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
LSM3P62310 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.08■□□□□ 0.64
LSM3P62310 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSM3P62310 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.08■□□□□ 0.64
LSM3P62310 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSM3P62310 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.08■□□□□ 0.64
LSM3P62310 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSM3P62310 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSM3P62310 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM3P62310 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM3P62310 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.07■□□□□ 0.64
LSM3P62310 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LSM3P62310 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LSM3P62310 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM3P62310 AF131216.4-201ENST00000638924 1588 ntBASIC19.07■□□□□ 0.64
LSM3P62310 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM3P62310 AP005212.1-201ENST00000581547 1997 ntBASIC19.07■□□□□ 0.64
LSM3P62310 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM3P62310 MIR6765-201ENST00000614092 87 ntBASIC19.07■□□□□ 0.64
LSM3P62310 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM3P62310 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM3P62310 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM3P62310 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LSM3P62310 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM3P62310 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.07■□□□□ 0.64
LSM3P62310 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM3P62310 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM3P62310 OXCT2P1-201ENST00000447263 1535 ntBASIC19.06■□□□□ 0.64
LSM3P62310 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LSM3P62310 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.06■□□□□ 0.64
LSM3P62310 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LSM3P62310 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.06■□□□□ 0.64
LSM3P62310 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.06■□□□□ 0.64
LSM3P62310 AL592293.1-201ENST00000502889 1188 ntBASIC19.06■□□□□ 0.64
LSM3P62310 AC009086.3-201ENST00000623486 1008 ntBASIC19.06■□□□□ 0.64
LSM3P62310 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM3P62310 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
LSM3P62310 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM3P62310 AC004687.1-201ENST00000579003 1625 ntBASIC19.06■□□□□ 0.64
LSM3P62310 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LSM3P62310 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LSM3P62310 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM3P62310 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.06■□□□□ 0.64
LSM3P62310 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM3P62310 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LSM3P62310 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.05■□□□□ 0.64
LSM3P62310 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
LSM3P62310 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM3P62310 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LSM3P62310 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM3P62310 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.05■□□□□ 0.64
LSM3P62310 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LSM3P62310 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LSM3P62310 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LSM3P62310 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM3P62310 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LSM3P62310 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM3P62310 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM3P62310 ABHD17AP4-201ENST00000411545 909 ntBASIC19.05■□□□□ 0.64
LSM3P62310 AC104564.3-201ENST00000582367 638 ntBASIC19.05■□□□□ 0.64
LSM3P62310 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.05■□□□□ 0.64
LSM3P62310 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.05■□□□□ 0.64
LSM3P62310 AC138932.1-201ENST00000534164 6830 ntBASIC19.05■□□□□ 0.64
LSM3P62310 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM3P62310 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM3P62310 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
LSM3P62310 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM3P62310 AL049796.1-201ENST00000565336 1766 ntBASIC19.04■□□□□ 0.64
LSM3P62310 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LSM3P62310 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM3P62310 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM3P62310 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.04■□□□□ 0.64
LSM3P62310 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LSM3P62310 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.04■□□□□ 0.64
LSM3P62310 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM3P62310 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LSM3P62310 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LSM3P62310 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM3P62310 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LSM3P62310 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM3P62310 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.04■□□□□ 0.64
LSM3P62310 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LSM3P62310 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms