Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC144652.1-201ENST00000609974 1624 ntBASIC14.74□□□□□ -0.05
CKS1BP61024 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS1BP61024 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CKS1BP61024 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.73□□□□□ -0.05
CKS1BP61024 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.73□□□□□ -0.05
CKS1BP61024 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKS1BP61024 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS1BP61024 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CKS1BP61024 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS1BP61024 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CKS1BP61024 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKS1BP61024 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CKS1BP61024 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS1BP61024 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.73□□□□□ -0.05
CKS1BP61024 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS1BP61024 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKS1BP61024 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.73□□□□□ -0.05
CKS1BP61024 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.73□□□□□ -0.05
CKS1BP61024 ABHD17AP5-201ENST00000580133 923 ntBASIC14.73□□□□□ -0.05
CKS1BP61024 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC14.73□□□□□ -0.05
CKS1BP61024 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC14.73□□□□□ -0.05
CKS1BP61024 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS1BP61024 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS1BP61024 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
CKS1BP61024 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS1BP61024 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKS1BP61024 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS1BP61024 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CKS1BP61024 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS1BP61024 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS1BP61024 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.72□□□□□ -0.05
CKS1BP61024 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC14.72□□□□□ -0.05
CKS1BP61024 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
CKS1BP61024 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS1BP61024 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS1BP61024 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS1BP61024 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS1BP61024 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CKS1BP61024 NTF6A-201ENST00000591175 560 ntBASIC14.72□□□□□ -0.05
CKS1BP61024 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CKS1BP61024 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CKS1BP61024 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CKS1BP61024 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS1BP61024 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CKS1BP61024 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS1BP61024 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC14.72□□□□□ -0.05
CKS1BP61024 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS1BP61024 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS1BP61024 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS1BP61024 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS1BP61024 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CKS1BP61024 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CKS1BP61024 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC14.72□□□□□ -0.05
CKS1BP61024 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS1BP61024 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS1BP61024 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CKS1BP61024 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS1BP61024 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CKS1BP61024 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CKS1BP61024 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS1BP61024 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS1BP61024 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS1BP61024 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.71□□□□□ -0.05
CKS1BP61024 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC14.71□□□□□ -0.05
CKS1BP61024 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CKS1BP61024 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CKS1BP61024 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CKS1BP61024 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.71□□□□□ -0.06
CKS1BP61024 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CKS1BP61024 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CKS1BP61024 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
CKS1BP61024 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CKS1BP61024 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.7□□□□□ -0.06
CKS1BP61024 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC14.7□□□□□ -0.06
CKS1BP61024 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CKS1BP61024 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CKS1BP61024 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 FBXW4P1-201ENST00000426721 2239 ntBASIC14.7□□□□□ -0.06
CKS1BP61024 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CKS1BP61024 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
CKS1BP61024 AC139530.1-201ENST00000575312 1977 ntBASIC14.69□□□□□ -0.06
CKS1BP61024 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS1BP61024 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS1BP61024 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CKS1BP61024 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms