Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN18P56856 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN18P56856 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN18P56856 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN18P56856 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.01■□□□□ 0.63
CLDN18P56856 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN18P56856 RAP2CP1-201ENST00000605103 478 ntBASIC19.01■□□□□ 0.63
CLDN18P56856 MYCNOS-205ENST00000641950 531 ntBASIC19.01■□□□□ 0.63
CLDN18P56856 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN18P56856 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN18P56856 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN18P56856 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN18P56856 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN18P56856 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN18P56856 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN18P56856 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN18P56856 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN18P56856 ECEL1P1-201ENST00000373592 1742 ntBASIC19■□□□□ 0.63
CLDN18P56856 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN18P56856 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN18P56856 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN18P56856 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN18P56856 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19■□□□□ 0.63
CLDN18P56856 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19■□□□□ 0.63
CLDN18P56856 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN18P56856 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19■□□□□ 0.63
CLDN18P56856 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN18P56856 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLDN18P56856 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN18P56856 AC010542.4-201ENST00000563151 1910 ntBASIC19■□□□□ 0.63
CLDN18P56856 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19■□□□□ 0.63
CLDN18P56856 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CLDN18P56856 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN18P56856 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN18P56856 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN18P56856 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN18P56856 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN18P56856 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.99■□□□□ 0.63
CLDN18P56856 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.99■□□□□ 0.63
CLDN18P56856 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLDN18P56856 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN18P56856 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN18P56856 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN18P56856 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN18P56856 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN18P56856 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLDN18P56856 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.98■□□□□ 0.63
CLDN18P56856 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN18P56856 AC012676.1-201ENST00000574705 1949 ntBASIC18.98■□□□□ 0.63
CLDN18P56856 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN18P56856 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.98■□□□□ 0.63
CLDN18P56856 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.98■□□□□ 0.63
CLDN18P56856 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.98■□□□□ 0.63
CLDN18P56856 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN18P56856 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN18P56856 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN18P56856 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.98■□□□□ 0.63
CLDN18P56856 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.97■□□□□ 0.63
CLDN18P56856 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.97■□□□□ 0.63
CLDN18P56856 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN18P56856 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN18P56856 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN18P56856 SLC7A5P2-201ENST00000553010 536 ntBASIC18.97■□□□□ 0.63
CLDN18P56856 AC008175.2-201ENST00000612840 297 ntBASIC18.97■□□□□ 0.63
CLDN18P56856 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CLDN18P56856 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CLDN18P56856 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.97■□□□□ 0.63
CLDN18P56856 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN18P56856 AC133561.1-201ENST00000568600 2415 ntBASIC18.96■□□□□ 0.63
CLDN18P56856 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.96■□□□□ 0.63
CLDN18P56856 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN18P56856 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.96■□□□□ 0.63
CLDN18P56856 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN18P56856 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CLDN18P56856 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN18P56856 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN18P56856 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN18P56856 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN18P56856 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN18P56856 AC026185.1-201ENST00000445748 174 ntBASIC18.96■□□□□ 0.63
CLDN18P56856 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
CLDN18P56856 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN18P56856 SLC7A5P1-201ENST00000568957 537 ntBASIC18.96■□□□□ 0.63
CLDN18P56856 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN18P56856 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CLDN18P56856 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms