Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CDH13P55290 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CDH13P55290 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH13P55290 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.71■□□□□ 0.91
CDH13P55290 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH13P55290 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CDH13P55290 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH13P55290 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.7■□□□□ 0.91
CDH13P55290 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
CDH13P55290 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CDH13P55290 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH13P55290 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
CDH13P55290 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH13P55290 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.7■□□□□ 0.9
CDH13P55290 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH13P55290 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH13P55290 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH13P55290 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.7■□□□□ 0.9
CDH13P55290 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.7■□□□□ 0.9
CDH13P55290 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH13P55290 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH13P55290 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH13P55290 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH13P55290 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH13P55290 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH13P55290 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH13P55290 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH13P55290 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDH13P55290 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH13P55290 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH13P55290 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH13P55290 BX842568.3-201ENST00000418104 571 ntBASIC20.69■□□□□ 0.9
CDH13P55290 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH13P55290 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDH13P55290 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH13P55290 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CDH13P55290 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH13P55290 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CDH13P55290 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH13P55290 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH13P55290 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.69■□□□□ 0.9
CDH13P55290 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH13P55290 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDH13P55290 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH13P55290 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH13P55290 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH13P55290 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH13P55290 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDH13P55290 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH13P55290 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH13P55290 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH13P55290 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH13P55290 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH13P55290 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.68■□□□□ 0.9
CDH13P55290 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.68■□□□□ 0.9
CDH13P55290 AC024257.2-201ENST00000549699 147 ntBASIC20.68■□□□□ 0.9
CDH13P55290 SMUG1P1-201ENST00000590640 811 ntBASIC20.68■□□□□ 0.9
CDH13P55290 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDH13P55290 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH13P55290 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH13P55290 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH13P55290 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH13P55290 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
CDH13P55290 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH13P55290 AP006587.3-201ENST00000525742 1516 ntBASIC20.68■□□□□ 0.9
CDH13P55290 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH13P55290 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDH13P55290 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH13P55290 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.67■□□□□ 0.9
CDH13P55290 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH13P55290 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH13P55290 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDH13P55290 AC131212.1-201ENST00000613771 668 ntBASIC20.67■□□□□ 0.9
CDH13P55290 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH13P55290 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH13P55290 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH13P55290 AL157384.1-201ENST00000445995 2473 ntBASIC20.66■□□□□ 0.9
CDH13P55290 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH13P55290 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH13P55290 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH13P55290 AC133561.4-201ENST00000566112 224 ntBASIC20.66■□□□□ 0.9
CDH13P55290 AL136162.1-201ENST00000607711 1078 ntBASIC20.66■□□□□ 0.9
CDH13P55290 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CDH13P55290 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH13P55290 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.66■□□□□ 0.9
CDH13P55290 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH13P55290 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH13P55290 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH13P55290 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH13P55290 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH13P55290 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH13P55290 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDH13P55290 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH13P55290 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDH13P55290 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDH13P55290 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH13P55290 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH13P55290 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDH13P55290 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH13P55290 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms