Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HCFC1P51610 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1P51610 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HCFC1P51610 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1P51610 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1P51610 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1P51610 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.59■□□□□ 0.57
HCFC1P51610 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
HCFC1P51610 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
HCFC1P51610 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HCFC1P51610 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.58■□□□□ 0.57
HCFC1P51610 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
HCFC1P51610 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.58■□□□□ 0.56
HCFC1P51610 MIPEPP3-201ENST00000412105 444 ntBASIC18.58■□□□□ 0.56
HCFC1P51610 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
HCFC1P51610 RARRES2P4-201ENST00000514074 484 ntBASIC18.58■□□□□ 0.56
HCFC1P51610 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.58■□□□□ 0.56
HCFC1P51610 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
HCFC1P51610 AC069236.1-201ENST00000604339 616 ntBASIC18.58■□□□□ 0.56
HCFC1P51610 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.58■□□□□ 0.56
HCFC1P51610 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HCFC1P51610 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HCFC1P51610 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HCFC1P51610 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HCFC1P51610 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.58■□□□□ 0.56
HCFC1P51610 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
HCFC1P51610 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HCFC1P51610 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HCFC1P51610 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HCFC1P51610 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HCFC1P51610 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCFC1P51610 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
HCFC1P51610 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.57■□□□□ 0.56
HCFC1P51610 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.57■□□□□ 0.56
HCFC1P51610 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.57■□□□□ 0.56
HCFC1P51610 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCFC1P51610 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCFC1P51610 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCFC1P51610 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HCFC1P51610 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HCFC1P51610 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.57■□□□□ 0.56
HCFC1P51610 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HCFC1P51610 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCFC1P51610 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCFC1P51610 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HCFC1P51610 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCFC1P51610 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCFC1P51610 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.56■□□□□ 0.56
HCFC1P51610 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.56■□□□□ 0.56
HCFC1P51610 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
HCFC1P51610 AC053503.5-201ENST00000601508 636 ntBASIC18.56■□□□□ 0.56
HCFC1P51610 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.56■□□□□ 0.56
HCFC1P51610 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCFC1P51610 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HCFC1P51610 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.56■□□□□ 0.56
HCFC1P51610 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCFC1P51610 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCFC1P51610 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.56■□□□□ 0.56
HCFC1P51610 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HCFC1P51610 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.56■□□□□ 0.56
HCFC1P51610 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.56■□□□□ 0.56
HCFC1P51610 AC092118.2-201ENST00000613495 667 ntBASIC18.56■□□□□ 0.56
HCFC1P51610 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.56■□□□□ 0.56
HCFC1P51610 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCFC1P51610 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCFC1P51610 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCFC1P51610 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.55■□□□□ 0.56
HCFC1P51610 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCFC1P51610 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.55■□□□□ 0.56
HCFC1P51610 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCFC1P51610 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.55■□□□□ 0.56
HCFC1P51610 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.55■□□□□ 0.56
HCFC1P51610 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.55■□□□□ 0.56
HCFC1P51610 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HCFC1P51610 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCFC1P51610 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCFC1P51610 AC093787.1-201ENST00000450396 207 ntBASIC18.55■□□□□ 0.56
HCFC1P51610 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.55■□□□□ 0.56
HCFC1P51610 AC091874.3-201ENST00000512672 1195 ntBASIC18.55■□□□□ 0.56
HCFC1P51610 AL162412.1-201ENST00000567129 965 ntBASIC18.55■□□□□ 0.56
HCFC1P51610 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCFC1P51610 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.55■□□□□ 0.56
HCFC1P51610 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.55■□□□□ 0.56
HCFC1P51610 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HCFC1P51610 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.55■□□□□ 0.56
HCFC1P51610 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCFC1P51610 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HCFC1P51610 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.54■□□□□ 0.56
HCFC1P51610 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.54■□□□□ 0.56
HCFC1P51610 KRT18P29-201ENST00000397031 1267 ntBASIC18.54■□□□□ 0.56
HCFC1P51610 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.54■□□□□ 0.56
HCFC1P51610 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HCFC1P51610 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.54■□□□□ 0.56
HCFC1P51610 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.54■□□□□ 0.56
HCFC1P51610 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.54■□□□□ 0.56
HCFC1P51610 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HCFC1P51610 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HCFC1P51610 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HCFC1P51610 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.54■□□□□ 0.56
HCFC1P51610 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms